Literature DB >> 12440996

Ribozymes, the first 20 years.

T R Cech1.   

Abstract

In 1982 we reported the first catalytic RNA or ribozyme: the self-splicing intron of the Tetrahymena pre-rRNA. Additional examples of natural ribozymes were soon found, and research in the field focused on their enzymic mechanism and secondary and tertiary structure. Ribozymes identified through in vitro selection extended the repertoire of RNA catalysis. Two directions of current and future interest are the determination of atomic-resolution structures of large ribozymes by X-ray crystallography and the structural and mechanistic analysis of complexes of ribozymes with protein facilitators of their activity.

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Year:  2002        PMID: 12440996     DOI: 10.1042/bst0301162

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  31 in total

1.  Automated identification of RNA conformational motifs: theory and application to the HM LSU 23S rRNA.

Authors:  Eli Hershkovitz; Emmanuel Tannenbaum; Shelley B Howerton; Ajay Sheth; Allen Tannenbaum; Loren Dean Williams
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

2.  The identification of novel RNA structural motifs using COMPADRES: an automated approach to structural discovery.

Authors:  Leven M Wadley; Anna Marie Pyle
Journal:  Nucleic Acids Res       Date:  2004-12-17       Impact factor: 16.971

3.  Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation.

Authors:  Alexander Serganov; Sonja Keiper; Lucy Malinina; Valentina Tereshko; Eugene Skripkin; Claudia Höbartner; Anna Polonskaia; Anh Tuân Phan; Richard Wombacher; Ronald Micura; Zbigniew Dauter; Andres Jäschke; Dinshaw J Patel
Journal:  Nat Struct Mol Biol       Date:  2005-02-20       Impact factor: 15.369

4.  Comparison of mode analyses at different resolutions applied to nucleic acid systems.

Authors:  Adam W Van Wynsberghe; Qiang Cui
Journal:  Biophys J       Date:  2005-08-12       Impact factor: 4.033

5.  Statistical analysis of RNA backbone.

Authors:  Eli Hershkovitz; Guillermo Sapiro; Allen Tannenbaum; Loren Dean Williams
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2006 Jan-Mar       Impact factor: 3.710

6.  A stochastic model of nonenzymatic nucleic acid replication: "elongators" sequester replicators.

Authors:  Chrisantha Fernando; Günter Von Kiedrowski; Eörs Szathmáry
Journal:  J Mol Evol       Date:  2007-04-13       Impact factor: 2.395

7.  Evaluating and learning from RNA pseudotorsional space: quantitative validation of a reduced representation for RNA structure.

Authors:  Leven M Wadley; Kevin S Keating; Carlos M Duarte; Anna Marie Pyle
Journal:  J Mol Biol       Date:  2007-06-27       Impact factor: 5.469

8.  Expanded hammerhead ribozymes containing addressable three-way junctions.

Authors:  Markus Wieland; Manuela Gfell; Jörg S Hartig
Journal:  RNA       Date:  2009-03-20       Impact factor: 4.942

9.  Active self-splicing group I introns in 23S rRNA genes of hyperthermophilic bacteria, derived from introns in eukaryotic organelles.

Authors:  Camilla L Nesbø; W Ford Doolittle
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-28       Impact factor: 11.205

Review 10.  The ribosome challenge to the RNA world.

Authors:  Jessica C Bowman; Nicholas V Hud; Loren Dean Williams
Journal:  J Mol Evol       Date:  2015-03-05       Impact factor: 2.395

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