Literature DB >> 12429865

IDEG6: a web tool for detection of differentially expressed genes in multiple tag sampling experiments.

Chiara Romualdi1, Stefania Bortoluzzi, Fabio D'Alessi, Gian Antonio Danieli.   

Abstract

Here we present a novel web tool for the statistical analysis of gene expression data in multiple tag sampling experiments. Differentially expressed genes are detected by using six different test statistics. Result tables, linked to the GenBank, UniGene, or LocusLink database, can be browsed or searched in different ways. Software is freely available at the site: http://telethon.bio.unipd.it/bioinfo/IDEG6_form/, together with additional information on statistical methodologies.

Mesh：

Year:  2003        PMID： 12429865     DOI： 10.1152/physiolgenomics.00096.2002

Source DB:  PubMed          Journal:  Physiol Genomics        ISSN： 1094-8341            Impact factor:   3.107


  182 in total

1.  Genome-wide transcriptome analysis shows extensive alternative RNA splicing in the zoonotic parasite Schistosoma japonicum.

Authors:  Xianyu Piao; Nan Hou; Pengfei Cai; Shuai Liu; Chuang Wu; Qijun Chen
Journal:  BMC Genomics       Date:  2014-08-26       Impact factor: 3.969

2.  Identification and characterization of regions of the rice genome associated with broad-spectrum, quantitative disease resistance.

Authors:  Randall J Wisser; Qi Sun; Scot H Hulbert; Stephen Kresovich; Rebecca J Nelson
Journal:  Genetics       Date:  2005-02-16       Impact factor: 4.562

3.  The colorectal microRNAome.

Authors:  Jordan M Cummins; Yiping He; Rebecca J Leary; Ray Pagliarini; Luis A Diaz; Tobias Sjoblom; Omer Barad; Zvi Bentwich; Anna E Szafranska; Emmanuel Labourier; Christopher K Raymond; Brian S Roberts; Hartmut Juhl; Kenneth W Kinzler; Bert Vogelstein; Victor E Velculescu
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-27       Impact factor: 11.205

4.  Detection of low-abundant novel transcripts in mouse hematopoietic stem cells.

Authors:  Hyeng-Soo Kim; Junmo Hwang; Young-Hun Kim; Seonggon Kim; Jae-Woong Lee; Hyung-Sik Kang; Kil Soo Kim; Ji-Hong Ha; Jin Woong Chung; Kyu-Tae Chang; Zae Young Ryoo; Sanggyu Lee
Journal:  Mol Genet Genomics       Date:  2009-07-08       Impact factor: 3.291

5.  ThMYC4E, candidate Blue aleurone 1 gene controlling the associated trait in Triticum aestivum.

Authors:  Na Li; Shiming Li; Kunpu Zhang; Wenjie Chen; Bo Zhang; Daowen Wang; Dengcai Liu; Baolong Liu; Huaigang Zhang
Journal:  PLoS One       Date:  2017-07-13       Impact factor: 3.240

6.  Transcription profiling and identification of infection-related genes in Phytophthora cactorum.

Authors:  Xiao-Ren Chen; Shen-Xin Huang; Ye Zhang; Gui-Lin Sheng; Bo-Yue Zhang; Qi-Yuan Li; Feng Zhu; Jing-You Xu
Journal:  Mol Genet Genomics       Date:  2017-12-07       Impact factor: 3.291

7.  Sorghum bmr6 mutant analysis demonstrates that a shared MYB1 transcription factor binding site in the promoter links the expression of genes in related pathways.

Authors:  Jieqin Li; Lihua Wang; Qiuwen Zhan; Yanlong Liu; Bisheng Fu; Chunming Wang
Journal:  Funct Integr Genomics       Date:  2013-09-18       Impact factor: 3.410

8.  A systematic analysis of miRNA transcriptome in Marek's disease virus-induced lymphoma reveals novel and differentially expressed miRNAs.

Authors:  Ling Lian; Lujiang Qu; Yanmei Chen; Susan J Lamont; Ning Yang
Journal:  PLoS One       Date:  2012-11-30       Impact factor: 3.240

9.  An expressed sequence tag analysis of the intertidal brown seaweeds Fucus serratus (L.) and F. vesiculosus (L.) (Heterokontophyta, Phaeophyceae) in response to abiotic stressors.

Authors:  Gareth A Pearson; Galice Hoarau; Asuncion Lago-Leston; James A Coyer; Michael Kube; Richard Reinhardt; Kolja Henckel; Ester T A Serrão; Erwan Corre; Jeanine L Olsen
Journal:  Mar Biotechnol (NY)       Date:  2009-07-17       Impact factor: 3.619

10.  A gene catalogue for post-diapause development of an anhydrobiotic arthropod Artemia franciscana.

Authors:  Wie-Hua Chen; Xiaomeng Ge; Weiwei Wang; Jun Yu; Songnian Hu
Journal:  BMC Genomics       Date:  2009-01-27       Impact factor: 3.969
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.