Literature DB >> 12429689

Primordial genetics: phenotype of the ribocyte.

Michael Yarus1.   

Abstract

The idea that the ancestors of modern cells were RNA cells (ribocytes) can be investigated by asking whether all essential cellular functions might be performed by RNAs. This requires isolating suitable molecules by selection-amplification when the predicted molecules are presently extinct. In fact, RNAs with many properties required during a period in which RNA was the major macromolecular agent in cells (an RNA world) have been selected in modern experiments. There is, accordingly, reason to inquire how such a ribocyte might appear, based on the properties of the RNAs that composed it. Combining the intrinsic qualities of RNA with the fundamental characteristics of selection from randomized sequence pools, one predicts ribocytes with a cell cycle measured (roughly) in weeks. Such cells likely had a rapidly varying genome, composed of many small genetic and catalytic elements made of tens of ribonucleotides. There are substantial arguments that, at the mid-RNA era, a subset of these nucleotides are reproducibly available and resemble the modern four. Such cells are predicted to evolve rapidly. Instead of modifying preexisting genes, ribocytes frequently draw new functions from an internal pool containing zeptomoles (<1 attomole) of predominantly inactive random sequences.

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Year:  2002        PMID: 12429689     DOI: 10.1146/annurev.genet.36.031902.105056

Source DB:  PubMed          Journal:  Annu Rev Genet        ISSN: 0066-4197            Impact factor:   16.830


  12 in total

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Authors:  Tadeusz Janas; Michael Yarus
Journal:  RNA       Date:  2003-11       Impact factor: 4.942

2.  Selection of the simplest RNA that binds isoleucine.

Authors:  Catherine Lozupone; Shankar Changayil; Irene Majerfeld; Michael Yarus
Journal:  RNA       Date:  2003-11       Impact factor: 4.942

Review 3.  How was membrane permeability produced in an RNA world?

Authors:  Alexander Vlassov
Journal:  Orig Life Evol Biosph       Date:  2005-04       Impact factor: 1.950

4.  Toward ribosomal RNA catalytic activity in the absence of protein.

Authors:  Rachel M Anderson; Miyun Kwon; Scott A Strobel
Journal:  J Mol Evol       Date:  2007-04-05       Impact factor: 2.395

5.  A Proposal of the Ur-proteome.

Authors:  Miryam Palacios-Pérez; Fernando Andrade-Díaz; Marco V José
Journal:  Orig Life Evol Biosph       Date:  2017-11-10       Impact factor: 1.950

6.  A membrane transporter for tryptophan composed of RNA.

Authors:  Teresa Janas; Tadeusz Janas; Michael Yarus
Journal:  RNA       Date:  2004-10       Impact factor: 4.942

7.  On the origin of life in the zinc world: 1. Photosynthesizing, porous edifices built of hydrothermally precipitated zinc sulfide as cradles of life on Earth.

Authors:  Armen Y Mulkidjanian
Journal:  Biol Direct       Date:  2009-08-24       Impact factor: 4.540

8.  The case for an early biological origin of DNA.

Authors:  Anthony M Poole; Nobuyuki Horinouchi; Ryan J Catchpole; Dayong Si; Makoto Hibi; Koichi Tanaka; Jun Ogawa
Journal:  J Mol Evol       Date:  2014-11-26       Impact factor: 2.395

9.  Comparative analysis of RNA families reveals distinct repertoires for each domain of life.

Authors:  Marc P Hoeppner; Paul P Gardner; Anthony M Poole
Journal:  PLoS Comput Biol       Date:  2012-11-01       Impact factor: 4.475

10.  Amino acid properties conserved in molecular evolution.

Authors:  Witold R Rudnicki; Teresa Mroczek; Paweł Cudek
Journal:  PLoS One       Date:  2014-06-26       Impact factor: 3.240

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