Literature DB >> 12428235

Stratification of pedigrees multiplex for systemic lupus erythematosus and for self-reported rheumatoid arthritis detects a systemic lupus erythematosus susceptibility gene (SLER1) at 5p15.3.

Bahram Namjou1, Swapan K Nath, Jeff Kilpatrick, Jennifer A Kelly, Jeff Reid, Judith A James, John B Harley.   

Abstract

OBJECTIVE: Arthritis is a common manifestation in systemic lupus erythematosus (SLE), appearing in approximately 85% of patients. Often, the polyarthritis at presentation of SLE cannot be distinguished from rheumatoid arthritis (RA) by physical examination or history. Indeed, physicians initially tell many SLE patients that they have RA (one source of "self-reported RA"), only to have SLE established later. In addition, RA aggregates in families with an SLE proband. We predicted that pedigrees multiplex for both SLE and for self-reported RA would better isolate particular genetic effects. If this proved to be true, we would then use the increased genetic homogeneity to more easily reveal genetic linkage.
METHODS: From a collection of 160 pedigrees multiplex for SLE, we selected 36 pedigrees that also contained >or=2 members with self-reported RA (19 pedigrees were African American, 14 were European American, and 3 were of other ethnic origin). Data from a genome scan of 307 microsatellite markers were evaluated for SLE linkage by contemporary genetic epidemiologic techniques.
RESULTS: The most significant evidence of linkage to SLE was obtained at 5p15.3 in the European American pedigrees by both parametric (logarithm of odds [LOD] score 6.2, P = 9.3 x 10(-8)) and nonparametric (LOD score 6.9, P = 1.7 x 10(-8)) methods. The best-fitting model for this putative SLE gene in this region was a recessive gene with a population frequency of 5% and with 50% penetrance in females and 15% penetrance in males at virtually 100% homogeneity.
CONCLUSION: For a genetically complex disease phenotype, an unusually powerful linkage has been found with SLE at 5p15.3 in European American pedigrees multiplex for SLE and for self-reported RA. This result predicts the presence of a gene at the top of chromosome 5 in this subset of patients that is important for the pathogenesis of SLE.

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Year:  2002        PMID: 12428235     DOI: 10.1002/art.10588

Source DB:  PubMed          Journal:  Arthritis Rheum        ISSN: 0004-3591


  8 in total

1.  Whole genomewide linkage screen for neural tube defects reveals regions of interest on chromosomes 7 and 10.

Authors:  E Rampersaud; A G Bassuk; D S Enterline; T M George; D G Siegel; E C Melvin; J Aben; J Allen; A Aylsworth; T Brei; J Bodurtha; C Buran; L E Floyd; P Hammock; B Iskandar; J Ito; J A Kessler; N Lasarsky; P Mack; J Mackey; D McLone; E Meeropol; L Mehltretter; L E Mitchell; W J Oakes; J S Nye; C Powell; K Sawin; R Stevenson; M Walker; S G West; G Worley; J R Gilbert; M C Speer
Journal:  J Med Genet       Date:  2005-04-14       Impact factor: 6.318

Review 2.  Unraveling the genetics of systemic lupus erythematosus.

Authors:  John B Harley; Jennifer A Kelly; Kenneth M Kaufman
Journal:  Springer Semin Immunopathol       Date:  2006-09-22

Review 3.  Current advances in the human lupus genetics.

Authors:  Nan Shen; Betty P Tsao
Journal:  Curr Rheumatol Rep       Date:  2004-10       Impact factor: 4.592

4.  Chromosome 17p12-q11 harbors susceptibility loci for systemic lupus erythematosus.

Authors:  Cecilia M Johansson; Renata Zunec; Mercedes A García; Hugo R Scherbarth; Guillermo A Tate; Sergio Paira; Sandra M Navarro; Carlos E Perandones; Susana Gamron; Alejandro Alvarellos; Cesar E Graf; Jorge Manni; Guillermo A Berbotto; Simon A Palatnik; Luis J Catoggio; Cristina G Battagliotti; Gian Domenico Sebastiani; Sergio Migliaresi; Mauro Galeazzi; Bernardo A Pons-Estel; Marta E Alarcón-Riquelme
Journal:  Hum Genet       Date:  2004-07-01       Impact factor: 4.132

5.  HTR1A a novel type 1 diabetes susceptibility gene on chromosome 5p13-q13.

Authors:  Samina Asad; Pernilla Nikamo; Alexandra Gyllenberg; Hedvig Bennet; Ola Hansson; Nils Wierup; Annelie Carlsson; Gun Forsander; Sten-Anders Ivarsson; Helena Larsson; Åke Lernmark; Bengt Lindblad; Johnny Ludvigsson; Claude Marcus; Kjersti S Rønningen; Jan Nerup; Flemming Pociot; Holger Luthman; Malin Fex; Ingrid Kockum
Journal:  PLoS One       Date:  2012-05-01       Impact factor: 3.240

Review 6.  Current status of lupus genetics.

Authors:  Andrea L Sestak; Swapan K Nath; Amr H Sawalha; John B Harley
Journal:  Arthritis Res Ther       Date:  2007       Impact factor: 5.156

7.  A genome-wide ordered-subset linkage analysis for rheumatoid arthritis.

Authors:  Desh Deep Mandhyan; Xana Kim-Howard; Matthew Gaines; Swapan K Nath
Journal:  BMC Proc       Date:  2007-12-18

8.  Deep sequencing reveals a DAP1 regulatory haplotype that potentiates autoimmunity in systemic lupus erythematosus.

Authors:  Prithvi Raj; Ran Song; Honglin Zhu; Linley Riediger; Dong-Jae Jun; Chaoying Liang; Carlos Arana; Bo Zhang; Yajing Gao; Benjamin E Wakeland; Igor Dozmorov; Jinchun Zhou; Jennifer A Kelly; Bernard R Lauwerys; Joel M Guthridge; Nancy J Olsen; Swapan K Nath; Chandrashekhar Pasare; Nicolai van Oers; Gary Gilkeson; Betty P Tsao; Patrick M Gaffney; Peter K Gregersen; Judith A James; Xiaoxia Zuo; David R Karp; Quan-Zhen Li; Edward K Wakeland
Journal:  Genome Biol       Date:  2020-11-19       Impact factor: 17.906

  8 in total

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