Literature DB >> 12425318

Extreme pathways and Kirchhoff's second law.

Nathan D Price, Iman Famili, Daniel A Beard, Bernhard Ø Palsson.   

Abstract

Mesh：

Year:  2002        PMID： 12425318      PMCID： PMC1302372          DOI： 10.1016/S0006-3495(02)75297-1

Source DB:  PubMed          Journal:  Biophys J        ISSN： 0006-3495            Impact factor:   4.033


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  54 in total

Review 1.  Thirteen years of building constraint-based in silico models of Escherichia coli.

Authors:  Jennifer L Reed; Bernhard Ø Palsson
Journal:  J Bacteriol       Date:  2003-05       Impact factor: 3.490

2.  Analysis of metabolic capabilities using singular value decomposition of extreme pathway matrices.

Authors:  Nathan D Price; Jennifer L Reed; Jason A Papin; Iman Famili; Bernhard O Palsson
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

3.  The convex basis of the left null space of the stoichiometric matrix leads to the definition of metabolically meaningful pools.

Authors:  Iman Famili; Bernhard O Palsson
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

4.  Thermodynamic calculations for biochemical transport and reaction processes in metabolic networks.

Authors:  Stefan J Jol; Anne Kümmel; Vassily Hatzimanikatis; Daniel A Beard; Matthias Heinemann
Journal:  Biophys J       Date:  2010-11-17       Impact factor: 4.033

5.  Kinetic constraints for formation of steady states in biochemical networks.

Authors:  Junli Liu
Journal:  Biophys J       Date:  2005-02-24       Impact factor: 4.033

6.  The geometry of the flux cone of a metabolic network.

Authors:  Clemens Wagner; Robert Urbanczik
Journal:  Biophys J       Date:  2005-09-23       Impact factor: 4.033

7.  Thermodynamically feasible kinetic models of reaction networks.

Authors:  Michael Ederer; Ernst Dieter Gilles
Journal:  Biophys J       Date:  2007-01-05       Impact factor: 4.033

8.  Candidate states of Helicobacter pylori's genome-scale metabolic network upon application of "loop law" thermodynamic constraints.

Authors:  Nathan D Price; Ines Thiele; Bernhard Ø Palsson
Journal:  Biophys J       Date:  2006-03-13       Impact factor: 4.033

9.  Elimination of thermodynamically infeasible loops in steady-state metabolic models.

Authors:  Jan Schellenberger; Nathan E Lewis; Bernhard Ø Palsson
Journal:  Biophys J       Date:  2011-02-02       Impact factor: 4.033

10.  Network-level analysis of metabolic regulation in the human red blood cell using random sampling and singular value decomposition.

Authors:  Christian L Barrett; Nathan D Price; Bernhard O Palsson
Journal:  BMC Bioinformatics       Date:  2006-03-13       Impact factor: 3.169
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