Literature DB >> 12424526

Evolutionary history of chromosome 10 in primates.

Lucia Carbone1, Mario Ventura, Sergio Tempesta, Mariano Rocchi, Nicoletta Archidiacono.   

Abstract

We have tracked the evolutionary history of chromosomes homologous to HSA10 (PHYL-10) in primates using appropriate panels of PCP, YAC, and BAC probes. This approach allowed us to delineate more precisely the PHYL-10 constitution in the ancestor of catarrhine, platyrrhine, and prosimians. The results suggest that (i) in the ancestor of prosimians PHYL-10 was organized in two separate PHYL-10p and PHYL-10q chromosomes; (ii) in the progenitor of New World monkeys PHYL-10p was a separate chromosome, while PHYL-10q was associated with a chromosome homologous to HSA16; (iii) in the ancestor of Old World monkeys PHYL-10 was a unique chromosome with a marker order corresponding to the orang form. We have also analyzed the cat, chosen as an outgroup for its very conserved karyotype. In agreement with published data our experiments show that the PHYL-10 in cat is structured in two blocks, PHYL-10p and PHYL-10q, both as part of larger chromosomes. The overall data indicate that, contrary to common opinion, PHYL-10p and PHYL-10q were distinct chromosomes in the primate ancestor. Analysis of the Saimiri sciureus (SSC) PHYL-10q marker order showed that it was isosequential with the Callithrix jacchus PHYL-10q, as well as with the PHYL-10q platyrrhine ancestral form. The SSC centromere, nevertheless, was located in a different chromosomal region, therefore suggesting that a centromeric repositioning event occurred in this species.

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Year:  2002        PMID: 12424526     DOI: 10.1007/s00412-002-0205-5

Source DB:  PubMed          Journal:  Chromosoma        ISSN: 0009-5915            Impact factor:   4.316


  14 in total

1.  The genome diversity and karyotype evolution of mammals.

Authors:  Alexander S Graphodatsky; Vladimir A Trifonov; Roscoe Stanyon
Journal:  Mol Cytogenet       Date:  2011-10-12       Impact factor: 2.009

Review 2.  Primate chromosome evolution: ancestral karyotypes, marker order and neocentromeres.

Authors:  R Stanyon; M Rocchi; O Capozzi; R Roberto; D Misceo; M Ventura; M F Cardone; F Bigoni; N Archidiacono
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

3.  Human, mouse, and rat genome large-scale rearrangements: stability versus speciation.

Authors:  Shaying Zhao; Jyoti Shetty; Lihua Hou; Arthur Delcher; Baoli Zhu; Kazutoyo Osoegawa; Pieter de Jong; William C Nierman; Robert L Strausberg; Claire M Fraser
Journal:  Genome Res       Date:  2004-09-13       Impact factor: 9.043

4.  Human chromosome 16 conservation in primates.

Authors:  Doriana Misceo; Mario Ventura; Verena Eder; Mariano Rocchi; Nicoletta Archidiacono
Journal:  Chromosome Res       Date:  2003       Impact factor: 5.239

5.  Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee.

Authors:  Mario Ventura; Claudia R Catacchio; Can Alkan; Tomas Marques-Bonet; Saba Sajjadian; Tina A Graves; Fereydoun Hormozdiari; Arcadi Navarro; Maika Malig; Carl Baker; Choli Lee; Emily H Turner; Lin Chen; Jeffrey M Kidd; Nicoletta Archidiacono; Jay Shendure; Richard K Wilson; Evan E Eichler
Journal:  Genome Res       Date:  2011-06-17       Impact factor: 9.043

6.  Independent centromere formation in a capricious, gene-free domain of chromosome 13q21 in Old World monkeys and pigs.

Authors:  Maria Francesca Cardone; Alicia Alonso; Michele Pazienza; Mario Ventura; Gabriella Montemurro; Lucia Carbone; Pieter J de Jong; Roscoe Stanyon; Pietro D'Addabbo; Nicoletta Archidiacono; Xinwei She; Evan E Eichler; Peter E Warburton; Mariano Rocchi
Journal:  Genome Biol       Date:  2006-10-13       Impact factor: 13.583

7.  Evolutionary-new centromeres preferentially emerge within gene deserts.

Authors:  Mariana Lomiento; Zhaoshi Jiang; Pietro D'Addabbo; Evan E Eichler; Mariano Rocchi
Journal:  Genome Biol       Date:  2008-12-16       Impact factor: 13.583

8.  Neocentromeres in 15q24-26 map to duplicons which flanked an ancestral centromere in 15q25.

Authors:  Mario Ventura; Jonathan M Mudge; Valeria Palumbo; Sally Burn; Elisabeth Blennow; Mauro Pierluigi; Roberto Giorda; Orsetta Zuffardi; Nicoletta Archidiacono; Michael S Jackson; Mariano Rocchi
Journal:  Genome Res       Date:  2003-08-12       Impact factor: 9.043

9.  Hominoid chromosomal rearrangements on 17q map to complex regions of segmental duplication.

Authors:  Maria Francesca Cardone; Zhaoshi Jiang; Pietro D'Addabbo; Nicoletta Archidiacono; Mariano Rocchi; Evan E Eichler; Mario Ventura
Journal:  Genome Biol       Date:  2008-02-07       Impact factor: 13.583

10.  Recurrent sites for new centromere seeding.

Authors:  Mario Ventura; Stefania Weigl; Lucia Carbone; Maria Francesca Cardone; Doriana Misceo; Mariagrazia Teti; Pietro D'Addabbo; Annelise Wandall; Erik Björck; Pieter J de Jong; Xinwei She; Evan E Eichler; Nicoletta Archidiacono; Mariano Rocchi
Journal:  Genome Res       Date:  2004-09       Impact factor: 9.043

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