Literature DB >> 12417136

New electron microscopy database and deposition system.

Mohamed Tagari1, Richard Newman, Monica Chagoyen, Jose Maria Carazo, Kim Henrick.   

Abstract

To manage, organize and disseminate data on the structure of biological macromolecules solved by 3D electron microscopy, an electron microscopy database has been set up at the European Bioinformatics Institute.

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Year:  2002        PMID： 12417136     DOI： 10.1016/s0968-0004(02)02176-x

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN： 0968-0004            Impact factor:   13.807


  63 in total

1.  Celebrating structural biology.

Authors: 
Journal:  Nat Struct Mol Biol       Date:  2011-12-05       Impact factor: 15.369

2.  Fitting multimeric protein complexes into electron microscopy maps using 3D Zernike descriptors.

Authors:  Juan Esquivel-Rodríguez; Daisuke Kihara
Journal:  J Phys Chem B       Date:  2012-03-30       Impact factor: 2.991

3.  Computational tools for the interactive exploration of proteomic and structural data.

Authors:  John H Morris; Elaine C Meng; Thomas E Ferrin
Journal:  Mol Cell Proteomics       Date:  2010-06-04       Impact factor: 5.911

4.  Using Sculptor and Situs for simultaneous assembly of atomic components into low-resolution shapes.

Authors:  Stefan Birmanns; Mirabela Rusu; Willy Wriggers
Journal:  J Struct Biol       Date:  2010-11-13       Impact factor: 2.867

5.  Fingerprint-based structure retrieval using electron density.

Authors:  Shuangye Yin; Nikolay V Dokholyan
Journal:  Proteins       Date:  2011-01-03

6.  The cell centered database project: an update on building community resources for managing and sharing 3D imaging data.

Authors:  Maryann E Martone; Joshua Tran; Willy W Wong; Joy Sargis; Lisa Fong; Stephen Larson; Stephan P Lamont; Amarnath Gupta; Mark H Ellisman
Journal:  J Struct Biol       Date:  2007-10-16       Impact factor: 2.867

Review 7.  Visualization software for molecular assemblies.

Authors:  Thomas D Goddard; Thomas E Ferrin
Journal:  Curr Opin Struct Biol       Date:  2007-08-28       Impact factor: 6.809

8.  Consensus among flexible fitting approaches improves the interpretation of cryo-EM data.

Authors:  Aqeel Ahmed; Paul C Whitford; Karissa Y Sanbonmatsu; Florence Tama
Journal:  J Struct Biol       Date:  2011-10-13       Impact factor: 2.867

9.  A toolbox for ab initio 3-D reconstructions in single-particle electron microscopy.

Authors:  Neil R Voss; Dmitry Lyumkis; Anchi Cheng; Pick-Wei Lau; Anke Mulder; Gabriel C Lander; Edward J Brignole; Denis Fellmann; Christopher Irving; Erica L Jacovetty; Albert Leung; James Pulokas; Joel D Quispe; Hanspeter Winkler; Craig Yoshioka; Bridget Carragher; Clinton S Potter
Journal:  J Struct Biol       Date:  2009-12-16       Impact factor: 2.867

10.  PDBe: Protein Data Bank in Europe.

Authors:  S Velankar; C Best; B Beuth; C H Boutselakis; N Cobley; A W Sousa Da Silva; D Dimitropoulos; A Golovin; M Hirshberg; M John; E B Krissinel; R Newman; T Oldfield; A Pajon; C J Penkett; J Pineda-Castillo; G Sahni; S Sen; R Slowley; A Suarez-Uruena; J Swaminathan; G van Ginkel; W F Vranken; K Henrick; G J Kleywegt
Journal:  Nucleic Acids Res       Date:  2009-10-25       Impact factor: 16.971
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