Literature DB >> 12385423

PCR with sequence-specific primer-based simultaneous genotyping of human platelet antigen-1 to -13w.

Jau-Yi Lyou1, Ying-Ju Chen, Hui-Yu Hu, Jeong-Shi Lin, Cheng-Hwai Tzeng.   

Abstract

BACKGROUND: Accurate human platelet antigen (HPA) typing is important for patients with diagnosis of alloimmune thrombocytopenic syndromes and provision of HPA-matched blood components for these patients. STUDY DESIGN AND METHODS: Thirteen sequence-specific primers (SSPs) designed on the basis of known published polymorphisms for HPA-1 to HPA-13w, respectively, were employed for simultaneous HPA genotyping. All PCR amplifications were carried out with identical cycling conditions in 96-well plates containing primer mixtures. A total of 300 blood samples from unrelated volunteer donors in Taiwan were included in the study.
RESULTS: All primers had specific amplification products. The typing results were available within 4 hours each time for up to four blood samples tested. Among the 13 HPAs, HPA-3 had the greatest heterozygosity with a gene frequency of 0.3267, 0.4967, and 0.1767 for HPA-3a/HPA-3a, HPA-3a/HPA-3b, and HPA-3b/HPA3-b, respectively. For the remaining 12 HPAs, the predominance of a/a homozygosity was noted for HPA-1, -2, -4, -5, and -6, with a frequency ranging from 0.9200 to 0.9967. The frequency of a/a homozygosity was 1.0000 for HPA-7w to -13w, except for HPA-10w, for which one case was observed to be HPA-10aw/HPA-10bw heterozygous. Excluding HPA-3, b/b homozygosity was noted in only one case (HPA-6b/HPA-6b). The prevalence rates of HPA-1 to -13w in this study were consistent with previous reports using different methods.
CONCLUSION: An extended, streamlined PCR-SSP protocol for simultaneous genotyping of HPA-1 to HPA-13w was established. This allows fast and reliable diagnosis of alloimmune thrombocytopenia, and is readily applicable to large-scale genetic population studies.

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Year:  2002        PMID: 12385423     DOI: 10.1046/j.1537-2995.2002.00172.x

Source DB:  PubMed          Journal:  Transfusion        ISSN: 0041-1132            Impact factor:   3.157


  2 in total

1.  Genotyping of Eight Human Platelet Antigen Systems in Serbian Blood Donors: Foundation for Platelet Apheresis Registry.

Authors:  Snezana Jovanovic Srzentic; Marko Lilic; Natasa Vavic; Ivana Radovic; Iva Djilas
Journal:  Transfus Med Hemother       Date:  2021-02-25       Impact factor: 3.747

2.  Human platelet antigen alleles in 998 Taiwanese blood donors determined by sequence-specific primer polymerase chain reaction.

Authors:  Shun-Chung Pai; Thierry Burnouf; Jen-Wei Chen; Liang-In Lin
Journal:  Biomed Res Int       Date:  2013-06-20       Impact factor: 3.411

  2 in total

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