Literature DB >> 12381297

The structure of an FF domain from human HYPA/FBP11.

Mark Allen1, Assaf Friedler, Oliver Schon, Mark Bycroft.   

Abstract

The FF domain is a 60 amino acid residue phosphopeptide-binding module found in a variety of eukaryotic proteins including the transcription elongation factor CA150, the splicing factor Prp40 and p190RHOGAP. We have determined the structure of an FF domain from HYPA/FBP11. The domain is composed of three alpha helices arranged in an orthogonal bundle with a 3(10) helix in the loop between the second and third alpha helices. The structure differs from those of other phosphopeptide-binding domains and represents a novel phosphopeptide-binding fold.

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Year:  2002        PMID: 12381297     DOI: 10.1016/s0022-2836(02)00968-3

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  36 in total

1.  The WW domain-containing proteins interact with the early spliceosome and participate in pre-mRNA splicing in vivo.

Authors:  Kai-Ti Lin; Ruei-Min Lu; Woan-Yuh Tarn
Journal:  Mol Cell Biol       Date:  2004-10       Impact factor: 4.272

2.  Transiently populated intermediate functions as a branching point of the FF domain folding pathway.

Authors:  Dmitry M Korzhnev; Tomasz L Religa; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-30       Impact factor: 11.205

3.  Prp40 Homolog A Is a Novel Centrin Target.

Authors:  Adalberto Díaz Casas; Walter J Chazin; Belinda Pastrana-Ríos
Journal:  Biophys J       Date:  2017-06-20       Impact factor: 4.033

4.  Conspicuous accumulation of transcription elongation repressor hrp130/CA150 on the intron-rich Balbiani ring 3 gene.

Authors:  Xin Sun; Jian Zhao; Karin Kylberg; Teresa Soop; Kevin Palka; Erik Sonnhammer; Neus Visa; Alla T Alzhanova-Ericsson; Bertil Daneholt
Journal:  Chromosoma       Date:  2004-10-06       Impact factor: 4.316

5.  FF domains of CA150 bind transcription and splicing factors through multiple weak interactions.

Authors:  Matthew J Smith; Sarang Kulkarni; Tony Pawson
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

6.  Solution structure of the Set2-Rpb1 interacting domain of human Set2 and its interaction with the hyperphosphorylated C-terminal domain of Rpb1.

Authors:  Ming Li; Hemali P Phatnani; Ziqiang Guan; Harvey Sage; Arno L Greenleaf; Pei Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-28       Impact factor: 11.205

7.  Gaussian-weighted RMSD superposition of proteins: a structural comparison for flexible proteins and predicted protein structures.

Authors:  Kelly L Damm; Heather A Carlson
Journal:  Biophys J       Date:  2006-03-24       Impact factor: 4.033

8.  NMR paves the way for atomic level descriptions of sparsely populated, transiently formed biomolecular conformers.

Authors:  Ashok Sekhar; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-18       Impact factor: 11.205

9.  Defining a length scale for millisecond-timescale protein conformational exchange.

Authors:  Ashok Sekhar; Pramodh Vallurupalli; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-25       Impact factor: 11.205

Review 10.  RNA polymerase II C-terminal domain: Tethering transcription to transcript and template.

Authors:  Jeffry L Corden
Journal:  Chem Rev       Date:  2013-09-16       Impact factor: 60.622

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