Literature DB >> 12377549

Genetic variation between Helicobacter pylori strains: gene acquisition or loss?

Santiago Garcia-Vallvé1, Paul J Janssen, Christos A Ouzounis.   

Abstract

Previously identified strain-specific genes of Helicobacter pylori were analysed for GC content and preference in codon usage. The results indicate that in H. pylori strain specificity is mainly driven by gene uptake. Incoming strains of Helicobacter or other species can occasionally donate genes but the identification of the donor species is hampered by ongoing evolutionary processes and the lack of an adequate number, or indeed a total absence, of gene homologues.

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Year:  2002        PMID: 12377549     DOI: 10.1016/s0966-842x(02)02446-0

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  5 in total

1.  HGT-DB: a database of putative horizontally transferred genes in prokaryotic complete genomes.

Authors:  S Garcia-Vallve; E Guzman; M A Montero; A Romeu
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

2.  Differences in genome content among Helicobacter pylori isolates from patients with gastritis, duodenal ulcer, or gastric cancer reveal novel disease-associated genes.

Authors:  Carolina Romo-González; Nina R Salama; Juan Burgeño-Ferreira; Veronica Ponce-Castañeda; Eduardo Lazcano-Ponce; Margarita Camorlinga-Ponce; Javier Torres
Journal:  Infect Immun       Date:  2009-02-23       Impact factor: 3.441

3.  Comparative genomics of Helicobacter pylori strains of China associated with different clinical outcome.

Authors:  Yuanhai You; Lihua He; Maojun Zhang; Jianying Fu; Yixin Gu; Binghua Zhang; Xiaoxia Tao; Jianzhong Zhang
Journal:  PLoS One       Date:  2012-06-06       Impact factor: 3.240

4.  Comparative genomic analyses of Streptococcus mutans provide insights into chromosomal shuffling and species-specific content.

Authors:  Fumito Maruyama; Mitsuhiko Kobata; Ken Kurokawa; Keishin Nishida; Atsuo Sakurai; Kazuhiko Nakano; Ryota Nomura; Shigetada Kawabata; Takashi Ooshima; Kenta Nakai; Masahira Hattori; Shigeyuki Hamada; Ichiro Nakagawa
Journal:  BMC Genomics       Date:  2009-08-05       Impact factor: 3.969

5.  Comparative genomic characterization of three Streptococcus parauberis strains in fish pathogen, as assessed by wide-genome analyses.

Authors:  Seong-Won Nho; Jun-ichi Hikima; Seong Bin Park; Ho Bin Jang; In Seok Cha; Motoshige Yasuike; Yoji Nakamura; Atsushi Fujiwara; Motohiko Sano; Kinya Kanai; Hidehiro Kondo; Ikuo Hirono; Haruko Takeyama; Takashi Aoki; Tae-Sung Jung
Journal:  PLoS One       Date:  2013-11-18       Impact factor: 3.240

  5 in total

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