Literature DB >> 12370783

Cytogenetic localization of 136 genes in the horse: comparative mapping with the human genome.

Dragan Milenkovic1, Anne Oustry-Vaiman, Teri L Lear, Alain Billault, Denis Mariat, François Piumi, Laurent Schibler, Edmond Cribiu, Gérard Guérin.   

Abstract

The aim of this study was to increase the number of type I markers on the horse cytogenetic map and to improve comparison with maps of other species, thus facilitating positional candidate cloning studies. BAC clones from two different sources were FISH mapped: homologous horse BAC clones selected from our newly extended BAC library using consensus primer sequences and heterologous goat BAC clones. We report the localization of 136 genes on the horse cytogenetic map, almost doubling the number of cytogenetically mapped genes with 48 localizations from horse BAC clones and 88 from goat BAC clones. For the first time, genes were mapped to ECA13p, ECA29, and probably ECA30. A total of 284 genes are now FISH mapped on the horse chromosomes. Comparison with the human map defines 113 conserved segments that include new homologous segments not identified by Zoo-FISH on ECA7 and ECA13p.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12370783     DOI: 10.1007/s00335-001-2137-4

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  15 in total

1.  The first-generation whole-genome radiation hybrid map in the horse identifies conserved segments in human and mouse genomes.

Authors:  Bhanu P Chowdhary; Terje Raudsepp; Srinivas R Kata; Glenda Goh; Lee V Millon; Veronica Allan; François Piumi; Gérard Guérin; June Swinburne; Matthew Binns; Teri L Lear; Jim Mickelson; James Murray; Douglas F Antczak; James E Womack; Loren C Skow
Journal:  Genome Res       Date:  2003-04       Impact factor: 9.043

2.  A high-resolution physical map of equine homologs of HSA19 shows divergent evolution compared with other mammals.

Authors:  Candice Brinkmeyer-Langford; Terje Raudsepp; Eun-Joon Lee; Glenda Goh; Alejandro A Schäffer; Richa Agarwala; Michelle L Wagner; Teruaki Tozaki; Loren C Skow; James E Womack; James R Mickelson; Bhanu P Chowdhary
Journal:  Mamm Genome       Date:  2005-09-14       Impact factor: 2.957

3.  Polymorphisms in equine immune response genes and their associations with infections.

Authors:  Petr Horín; Jirrí Smola; Ján Matiasovic; Mirko Vyskocil; Ludmila Lukeszová; Katarína Tomanová; Petr Králík; Vladimír Glasnák; Dana Schröffelová; Ales Knoll; Markéta Sedlinská; Leona Krenková; Petr Jahn
Journal:  Mamm Genome       Date:  2004-10       Impact factor: 2.957

Review 4.  Applied equine genetics.

Authors:  C J Finno; D L Bannasch
Journal:  Equine Vet J       Date:  2014-06-25       Impact factor: 2.888

5.  Multidirectional cross-species painting illuminates the history of karyotypic evolution in Perissodactyla.

Authors:  Vladimir A Trifonov; Roscoe Stanyon; Anastasia I Nesterenko; Beiyuan Fu; Polina L Perelman; Patricia C M O'Brien; Gary Stone; Nadezhda V Rubtsova; Marlys L Houck; Terence J Robinson; Malcolm A Ferguson-Smith; Gauthier Dobigny; Alexander S Graphodatsky; Fengtang Yang
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

6.  A detailed physical map of the horse Y chromosome.

Authors:  Terje Raudsepp; Avni Santani; Barbara Wallner; Srinivas R Kata; Chengwei Ren; Hong-Bin Zhang; James E Womack; Loren C Skow; Bhanu P Chowdhary
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-14       Impact factor: 11.205

Review 7.  The horse genome derby: racing from map to whole genome sequence.

Authors:  Bhanu P Chowdhary; Terje Raudsepp
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

8.  Analysis of a candidate gene for behavioural trait variability in horses: catechol-O-methyltransferase (COMT).

Authors:  S Dall'Olio; R Davoli; L Nanni Costa
Journal:  Vet Res Commun       Date:  2009-09       Impact factor: 2.459

9.  A 4,103 marker integrated physical and comparative map of the horse genome.

Authors:  T Raudsepp; A Gustafson-Seabury; K Durkin; M L Wagner; G Goh; C M Seabury; C Brinkmeyer-Langford; E-J Lee; R Agarwala; E Stallknecht-Rice; A A Schäffer; L C Skow; T Tozaki; H Yasue; M C T Penedo; L A Lyons; K A Khazanehdari; M M Binns; J N MacLeod; O Distl; G Guérin; T Leeb; J R Mickelson; B P Chowdhary
Journal:  Cytogenet Genome Res       Date:  2008-10-14       Impact factor: 1.636

10.  Genome-wide search for markers associated with osteochondrosis in Hanoverian warmblood horses.

Authors:  Claudia Dierks; Kathrin Löhring; Virginie Lampe; Catherine Wittwer; Cord Drögemüller; Ottmar Distl
Journal:  Mamm Genome       Date:  2007-09-29       Impact factor: 2.957

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.