Literature DB >> 12370045

Mimetics of the peptide beta-strand.

Matthew P Glenn1, David P Fairlie.   

Abstract

Bioactive structures of peptides represent important clues for drug discovery and development although peptides themselves have substantial limitations as drugs. One promising approach to overcoming the limitations of peptides is to progressively replace amide bonds in peptides with non-peptidic constraints that bring drug-like properties like stability and bioavailability to the molecules. These constraints can also be used to mould molecules into shapes which mimic key elements of protein secondary structure that confer bioactivity to protein surfaces. Preorganizing a molecule into the shape recognized by a receptor results in high affinity binding though a considerable entropy saving and is an effective approach to engineering highly bioactive drug leads. One peptide structure, the extended beta strand, has only recently been identified as a fundamental recognition element in physiological processes. Relatively few molecules have been described as constrained mimics of extended peptide conformations. We now summarize some approaches to mimicking peptide beta strands, and illustrate these with examples of bioactive, stable and bioavailable molecules that are conformationally biased to mimic the extended peptide beta strand.

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Year:  2002        PMID: 12370045     DOI: 10.2174/1389557023405747

Source DB:  PubMed          Journal:  Mini Rev Med Chem        ISSN: 1389-5575            Impact factor:   3.862


  5 in total

1.  The C terminus of the nuclear protein NuMA: phylogenetic distribution and structure.

Authors:  Patricia C Abad; I Saira Mian; Cedric Plachot; Aniysha Nelpurackal; Carol Bator-Kelly; Sophie A Lelièvre
Journal:  Protein Sci       Date:  2004-10       Impact factor: 6.725

2.  β-Strand mimics based on tetrahydropyridazinedione (tpd) peptide stitching.

Authors:  Chang Won Kang; Matthew P Sarnowski; Sujeewa Ranatunga; Lukasz Wojtas; Rainer S Metcalf; Wayne C Guida; Juan R Del Valle
Journal:  Chem Commun (Camb)       Date:  2015-11-21       Impact factor: 6.222

3.  Synthesis and conformational analysis of bicyclic extended dipeptide surrogates.

Authors:  Sujeewa Ranatunga; Wathsala Liyanage; Juan R Del Valle
Journal:  J Org Chem       Date:  2010-08-06       Impact factor: 4.354

4.  Alkyne-linked 2,2-disubstituted-indolin-3-one oligomers as extended beta-strand mimetics.

Authors:  Pauline N Wyrembak; Andrew D Hamilton
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

Review 5.  NMR-based approaches for the identification and optimization of inhibitors of protein-protein interactions.

Authors:  Elisa Barile; Maurizio Pellecchia
Journal:  Chem Rev       Date:  2014-04-08       Impact factor: 60.622

  5 in total

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