Literature DB >> 12370017

Is tRNA binding or tRNA mimicry mandatory for translation factors?

Ole Kristensen1, Martin Laurberg, Anders Liljas, Maria Selmer.   

Abstract

tRNA is the adaptor in the translation process. The ribosome has three sites for tRNA, the A-, P-, and E-sites. The tRNAs bridge between the ribosomal subunits with the decoding site and the mRNA on the small or 30S subunit and the peptidyl transfer site on the large or 50S subunit. The possibility that translation release factors could mimic tRNA has been discussed for a long time, since their function is very similar to that of tRNA. They identify stop codons of the mRNA presented in the decoding site and hydrolyse the nascent peptide from the peptidyl tRNA in the peptidyl transfer site. The structures of eubacterial release factors are not yet known, and the first example of tRNA mimicry was discovered when elongation factor G (EF-G) was found to have a closely similar shape to a complex of elongation factor Tu (EF-Tu) with aminoacyl-tRNA. An even closer imitation of the tRNA shape is seen in ribosome recycling factor (RRF). The number of proteins mimicking tRNA is rapidly increasing. This primarily concerns translation factors. It is now evident that in some sense they are either tRNA mimics, GTPases or possibly both.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12370017     DOI: 10.2174/1389203023380837

Source DB:  PubMed          Journal:  Curr Protein Pept Sci        ISSN: 1389-2037            Impact factor:   3.272


  5 in total

1.  Principles of stop-codon reading on the ribosome.

Authors:  Johan Sund; Martin Andér; Johan Aqvist
Journal:  Nature       Date:  2010-05-30       Impact factor: 49.962

2.  tRNA-mRNA mimicry drives translation initiation from a viral IRES.

Authors:  David A Costantino; Jennifer S Pfingsten; Robert P Rambo; Jeffrey S Kieft
Journal:  Nat Struct Mol Biol       Date:  2007-12-23       Impact factor: 15.369

Review 3.  Viral IRES RNA structures and ribosome interactions.

Authors:  Jeffrey S Kieft
Journal:  Trends Biochem Sci       Date:  2008-05-28       Impact factor: 13.807

4.  Structural and functional insights into the chloroplast ATP-dependent Clp protease in Arabidopsis.

Authors:  Lars L E Sjögren; Tara M Stanne; Bo Zheng; Sirkka Sutinen; Adrian K Clarke
Journal:  Plant Cell       Date:  2006-09-15       Impact factor: 11.277

5.  The conserved GTPase HflX is a ribosome splitting factor that binds to the E-site of the bacterial ribosome.

Authors:  Mackenzie L Coatham; Harland E Brandon; Jeffrey J Fischer; Tobias Schümmer; Hans-Joachim Wieden
Journal:  Nucleic Acids Res       Date:  2016-01-04       Impact factor: 16.971

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.