Literature DB >> 12367636

A transcriptome atlas of the mouse brain at cellular resolution.

James P Carson1, Christina Thaller, Gregor Eichele.   

Abstract

A genome-wide expression atlas of the nervous system at cellular resolution would be a valuable resource for neurobiology, genetics, developmental biology and medicine. Progress in automation of in situ hybridization makes such an atlas possible. Standardized and computerized annotation of expression patterns will be critical for producing a searchable atlas database that can be accessed through the internet.

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Year:  2002        PMID： 12367636     DOI： 10.1016/s0959-4388(02)00356-2

Source DB:  PubMed          Journal:  Curr Opin Neurobiol        ISSN： 0959-4388            Impact factor:   6.627


  39 in total

1.  GenePaint.org: an atlas of gene expression patterns in the mouse embryo.

Authors:  Axel Visel; Christina Thaller; Gregor Eichele
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  A geometric database for gene expression data.

Authors:  Tao Ju; Joe Warren; Gregor Eichele; Christina Thaller; Wah Chiu; James Carson
Journal:  Symp Geom Process       Date:  2003

Review 3.  Analysing the developing brain transcriptome with the GenePaint platform.

Authors:  Gonzalo Alvarez-Bolado; Gregor Eichele
Journal:  J Physiol       Date:  2006-07-06       Impact factor: 5.182

Review 4.  Web-based digital gene expression atlases for the mouse.

Authors:  Lars Geffers; Bernhard Herrmann; Gregor Eichele
Journal:  Mamm Genome       Date:  2012-08-31       Impact factor: 2.957

5.  Landmark/Image-based Deformable Registration of Gene Expression Data.

Authors:  Uday Kurkure; Yen H Le; Nikos Paragios; James P Carson; Tao Ju; Ioannis A Kakadiaris
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2011-06-20

6.  An efficient algorithm for mapping imaging data to 3D unstructured grids in computational biomechanics.

Authors:  Daniel R Einstein; Andrew P Kuprat; Xiangmin Jiao; James P Carson; David M Einstein; Richard E Jacob; Richard A Corley
Journal:  Int J Numer Method Biomed Eng       Date:  2012-05-16       Impact factor: 2.747

7.  The E-protein Tcf4 interacts with Math1 to regulate differentiation of a specific subset of neuronal progenitors.

Authors:  Adriano Flora; Jesus J Garcia; Christina Thaller; Huda Y Zoghbi
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-18       Impact factor: 11.205

8.  Transcriptome analysis identifies genes with enriched expression in the mouse central extended amygdala.

Authors:  J A J Becker; K Befort; C Blad; D Filliol; A Ghate; D Dembele; C Thibault; M Koch; J Muller; A Lardenois; O Poch; B L Kieffer
Journal:  Neuroscience       Date:  2008-08-14       Impact factor: 3.590

9.  Automated pipeline for atlas-based annotation of gene expression patterns: application to postnatal day 7 mouse brain.

Authors:  James Carson; Tao Ju; Musodiq Bello; Christina Thaller; Joe Warren; Ioannis A Kakadiaris; Wah Chiu; Gregor Eichele
Journal:  Methods       Date:  2009-08-19       Impact factor: 3.608

10.  Mouse models of MeCP2 disorders share gene expression changes in the cerebellum and hypothalamus.

Authors:  Shay Ben-Shachar; Maria Chahrour; Christina Thaller; Chad A Shaw; Huda Y Zoghbi
Journal:  Hum Mol Genet       Date:  2009-04-15       Impact factor: 6.150
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