Literature DB >> 12351872

Solvent entropy contribution to the free energy of protein crystallization.

Peter G Vekilov1, Angela R Feeling-Taylor, Siu Tung Yau, Dimiter Petsev.   

Abstract

We show with three proteins that trapping and release of the water molecules upon crystallization is a determinant of the crystallization thermodynamics. With HbC, a strong retrograde solubility dependence on temperature yields a high positive enthalpy of 155 kJ mol(-1), i.e., crystallization is only possible because of the huge entropy gain of 610 J mol(-1) x K(-1), stemming from the release of up to 10 water molecules per protein intermolecular contact. With apoferritin, the enthalpy of crystallization is close to zero. The main component in the crystallization driving force is the entropy gain due to the release upon crystallization of two water molecules bound to one protein molecules in solution. With both proteins, the density of the growth sites imaged by AFM is in excellent agreement with a calculation using the crystallization free energy. With lysozyme, the entropy effect due to the restructuring of the water molecules is negative. This leads to higher solubility.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12351872     DOI: 10.1107/s0907444902014312

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  14 in total

1.  Thermodynamics of the hydrophobicity in crystallization of insulin.

Authors:  Lisa Bergeron; Luis F Filobelo; Oleg Galkin; Peter G Vekilov
Journal:  Biophys J       Date:  2003-12       Impact factor: 4.033

2.  Application of protein engineering to enhance crystallizability and improve crystal properties.

Authors:  Zygmunt S Derewenda
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-04-21

3.  Monoclinic form of isopentenyl diphosphate isomerase: a case of polymorphism in biomolecular crystals.

Authors:  Jérôme de Ruyck; Yamina Oudjama; Johan Wouters
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-03-21

4.  Improvement of the crystallizability and expression of an RNA crystallization chaperone.

Authors:  Priyadarshini P Ravindran; Annie Héroux; Jing-Dong Ye
Journal:  J Biochem       Date:  2011-07-23       Impact factor: 3.387

5.  Effects of protein engineering and rational mutagenesis on crystal lattice of single chain antibody fragments.

Authors:  Sibel Kalyoncu; Jeongmin Hyun; Jennifer C Pai; Jennifer L Johnson; Kevin Entzminger; Avni Jain; David P Heaner; Ivan A Morales; Thomas M Truskett; Jennifer A Maynard; Raquel L Lieberman
Journal:  Proteins       Date:  2014-03-24

Review 6.  A synergistic approach to protein crystallization: combination of a fixed-arm carrier with surface entropy reduction.

Authors:  Andrea F Moon; Geoffrey A Mueller; Xuejun Zhong; Lars C Pedersen
Journal:  Protein Sci       Date:  2010-05       Impact factor: 6.725

7.  Enhanced crystal packing due to solvent reorganization through reductive methylation of lysine residues in oxidoreductase from Streptococcus pneumoniae.

Authors:  Yao Fan; Andrzej Joachimiak
Journal:  J Struct Funct Genomics       Date:  2010-02-02

8.  Determination of the transition-state entropy for aggregation suggests how the growth of sickle cell hemoglobin polymers can be slowed.

Authors:  Peter G Vekilov; Oleg Galkin; B Montgomery Pettitt; Nihar Choudhury; Ronald L Nagel
Journal:  J Mol Biol       Date:  2008-01-16       Impact factor: 5.469

9.  Structure of the nucleocapsid-binding domain from the mumps virus polymerase; an example of protein folding induced by crystallization.

Authors:  Richard L Kingston; Leslie S Gay; Walter S Baase; Brian W Matthews
Journal:  J Mol Biol       Date:  2008-01-11       Impact factor: 5.469

Review 10.  The "Sticky Patch" Model of Crystallization and Modification of Proteins for Enhanced Crystallizability.

Authors:  Zygmunt S Derewenda; Adam Godzik
Journal:  Methods Mol Biol       Date:  2017
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.