Literature DB >> 12323148

Improved Lanczos algorithms for blackbox MRS data quantitation.

T Laudadio1, N Mastronardi, L Vanhamme, P Van Hecke, S Van Huffel.   

Abstract

Magnetic resonance spectroscopy (MRS) has been shown to be a potentially important medical diagnostic tool. The success of MRS depends on the quantitative data analysis, i.e., the interpretation of the signal in terms of relevant physical parameters, such as frequencies, decay constants, and amplitudes. A variety of time-domain algorithms to extract parameters have been developed. On the one hand, there are so-called blackbox methods. Minimal user interaction and limited incorporation of prior knowledge are inherent to this type of method. On the other hand, interactive methods exist that are iterative, require user involvement, and allow inclusion of prior knowledge. We focus on blackbox methods. The computationally most intensive part of these blackbox methods is the computation of the singular value decomposition (SVD) of a Hankel matrix. Our goal is to reduce the needed computational time without affecting the accuracy of the parameters of interest. To this end, algorithms based on the Lanczos method are suitable because the main computation at each step, a matrix-vector product, can be efficiently performed by means of the fast Fourier transform exploiting the structure of the involved matrix. We compare the performance in terms of accuracy and efficiency of four algorithms: the classical SVD algorithm based on the QR decomposition, the Lanczos algorithm, the Lanczos algorithm with partial reorthogonalization, and the implicitly restarted Lanczos algorithm. Extensive simulation studies show that the latter two algorithms perform best.

Entities:  

Mesh:

Year:  2002        PMID: 12323148     DOI: 10.1006/jmre.2002.2593

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  16 in total

1.  (1)H-MRS of brain metabolites in migraine without aura: absolute quantification using the phantom replacement technique.

Authors:  Harmen Reyngoudt; Yves De Deene; Benedicte Descamps; Koen Paemeleire; Eric Achten
Journal:  MAGMA       Date:  2010-08-13       Impact factor: 2.310

2.  Natural linewidth chemical shift imaging (NL-CSI).

Authors:  Adil Bashir; Dmitriy A Yablonskiy
Journal:  Magn Reson Med       Date:  2006-07       Impact factor: 4.668

Review 3.  Quantification in magnetic resonance spectroscopy based on semi-parametric approaches.

Authors:  Danielle Graveron-Demilly
Journal:  MAGMA       Date:  2013-07-28       Impact factor: 2.310

4.  Computation of brain metabolite ratios in single-voxel proton MR spectroscopy: comparison between semiautomatic and automatic software.

Authors:  L N Mazzoni; G Belli; A Ginestroni; A Pratesi; S Agnoloni; S Diciotti; M Mascalchi
Journal:  Radiol Med       Date:  2009-06-26       Impact factor: 3.469

5.  Tract-based magnetic resonance spectroscopy of the cingulum bundles at 7 T.

Authors:  René C W Mandl; Martijn P van den Heuvel; Dennis W J Klomp; Vincent O Boer; Jeroen C W Siero; Peter R Luijten; Hilleke E Hulshoff Pol
Journal:  Hum Brain Mapp       Date:  2011-06-14       Impact factor: 5.038

Review 6.  Quantitative proton magnetic resonance spectroscopy and spectroscopic imaging of the brain: a didactic review.

Authors:  Jeffry R Alger
Journal:  Top Magn Reson Imaging       Date:  2010-04

7.  Comparison of reproducibility of single voxel spectroscopy and whole-brain magnetic resonance spectroscopy imaging at 3T.

Authors:  Yue Zhang; Edward Taub; Nouha Salibi; Gitendra Uswatte; Andrew A Maudsley; Sulaiman Sheriff; Brent Womble; Victor W Mark; David C Knight
Journal:  NMR Biomed       Date:  2018-02-13       Impact factor: 4.044

8.  Optimization of Single Voxel MR Spectroscopy Sequence Parameters and Data Analysis Methods for Thermometry in Deep Hyperthermia Treatments.

Authors:  J Hartmann; J Gellermann; T Brandt; M Schmidt; S Pyatykh; J Hesser; O Ott; R Fietkau; C Bert
Journal:  Technol Cancer Res Treat       Date:  2016-07-14

9.  Viscoelasticity imaging using ultrasound: parameters and error analysis.

Authors:  M Sridhar; J Liu; M F Insana
Journal:  Phys Med Biol       Date:  2007-04-10       Impact factor: 3.609

10.  Automated whole-brain N-acetylaspartate proton MRS quantification.

Authors:  Brian J Soher; William E Wu; Assaf Tal; Pippa Storey; Ke Zhang; James S Babb; Ivan I Kirov; Yvonne W Lui; Oded Gonen
Journal:  NMR Biomed       Date:  2014-09-05       Impact factor: 4.044

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.