Literature DB >> 12270266

Influence of reagents formulation on real-time PCR parameters.

J S Burgos1, C Ramírez, R Tenorio, I Sastre, M J Bullido.   

Abstract

Real-time polymerase chain reaction (PCR) techniques are increasingly used to quantify target sequences for diagnostic and research purposes. Due to its 'quantitative' character, it is very important to determine the variability of this technique correlating with several experimental conditions. The objective of this study was to analyse the effect of manufacturing lots of PCR reagents on two main PCR parameters, specificity and sensitivity. For this study, we used four different amplicons, using either mouse genomic DNA or viral DNA. Although a PCR product could be obtained in any of the conditions, we observed that there are relevant variations in sensitivity depending on the reagents formulation. We conclude that different lots of reagents may determine the analytical performance of PCR assays indicating that reagents testing are of special importance when the PCR protocol is used for quantitative purposes. Copyright 2002 Elsevier Science Ltd.

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Year:  2002        PMID: 12270266     DOI: 10.1006/mcpr.2002.0419

Source DB:  PubMed          Journal:  Mol Cell Probes        ISSN: 0890-8508            Impact factor:   2.365


  12 in total

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2.  Herpes simplex virus type 1 infection via the bloodstream with apolipoprotein E dependence in the gonads is influenced by gender.

Authors:  Javier S Burgos; Carlos Ramirez; Isabel Sastre; Juan M Alfaro; Fernando Valdivieso
Journal:  J Virol       Date:  2005-02       Impact factor: 5.103

3.  Hematogenous vertical transmission of herpes simplex virus type 1 in mice.

Authors:  Javier S Burgos; Carlos Ramirez; Fernando Guzman-Sanchez; Juan M Alfaro; Isabel Sastre; Fernando Valdivieso
Journal:  J Virol       Date:  2006-03       Impact factor: 5.103

4.  Effect of apolipoprotein E on the cerebral load of latent herpes simplex virus type 1 DNA.

Authors:  Javier S Burgos; Carlos Ramirez; Isabel Sastre; Fernando Valdivieso
Journal:  J Virol       Date:  2006-06       Impact factor: 5.103

5.  Padlock probe-mediated qRT-PCR for DNA computing answer determination.

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Journal:  Nat Comput       Date:  2011-06       Impact factor: 1.690

6.  ICP47 mediates viral neuroinvasiveness by induction of TAP protein following intravenous inoculation of herpes simplex virus type 1 in mice.

Authors:  Javier S Burgos; Esther Serrano-Saiz; Isabel Sastre; Fernando Valdivieso
Journal:  J Neurovirol       Date:  2006-12       Impact factor: 2.643

7.  Changes in immunoglobulin levels related to herpes simplex virus type 1 brain infection in pregnant mice.

Authors:  Javier S Burgos; Carlos Ramirez; Anna Brachet; Juan M Alfaro; Isabel Sastre; Fernando Valdivieso
Journal:  J Neurovirol       Date:  2007-06       Impact factor: 2.643

8.  Impact of antibiotic treatments on the expression of the R plasmid tra genes and on the host innate immune activity during pRAS1 bearing Aeromonas hydrophila infection in zebrafish (Danio rerio).

Authors:  Leon Cantas; Paul J Midtlyng; Henning Sørum
Journal:  BMC Microbiol       Date:  2012-03-19       Impact factor: 3.605

9.  Boundaries of the origin of replication: creation of a pET-28a-derived vector with p15A copy control allowing compatible coexistence with pET vectors.

Authors:  Sarmitha Sathiamoorthy; Jumi A Shin
Journal:  PLoS One       Date:  2012-10-22       Impact factor: 3.240

10.  Improved RNA quality and TaqMan Pre-amplification method (PreAmp) to enhance expression analysis from formalin fixed paraffin embedded (FFPE) materials.

Authors:  Jinghuan Li; Paul Smyth; Susanne Cahill; Karen Denning; Richard Flavin; Sinead Aherne; Marco Pirotta; Simone M Guenther; John J O'Leary; Orla Sheils
Journal:  BMC Biotechnol       Date:  2008-02-06       Impact factor: 2.563

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