Literature DB >> 12269796

Weak protein-protein interactions are sufficient to drive assembly of hepatitis B virus capsids.

Pablo Ceres1, Adam Zlotnick.   

Abstract

Hepatitis B virus (HBV) is an enveloped DNA virus with a spherical capsid (or core). The capsid is constructed from 120 copies of the homodimeric capsid protein arranged with T = 4 icosahedral symmetry. We examined in vitro assembly of purified E. coli expressed HBV capsid protein. After equilibration, concentrations of capsid and dimer were evaluated by size exclusion chromatography. The extent of assembly increased as temperature and ionic strength increased. The concentration dependence of capsid assembly conformed to the equilibrium expression: K(capsid) = [capsid]/[dimer](120). Given the known geometry for HBV capsids and dimers, the per capsid assembly energy was partitioned into energy per subunit-subunit contact. We were able to make three major conclusions. (i) Weak interactions (from -2.9 kcal/mol at 21 degrees C in low salt to -4.4 kcal/mol at 37 degrees C in high salt) at each intersubunit contact result in a globally stable capsid; weak intersubunit interactions may be the basis for the phenomenon of capsid breathing. (ii) HBV assembly is characterized by positive enthalpy and entropy. The reaction is entropy-driven, consistent with the largely hydrophobic contacts found in the crystal structure. (iii) Increasing NaCl concentration increases the magnitude of free energy, enthalpy, and entropy, as if ionic strength were increasing the amount of hydrophobic surface buried by assembly. This last point leads us to suggest that salt acts by inducing a conformational change in the dimer from an assembly-inactive form to an assembly-active form. This model of conformational change linked to assembly is consistent with immunological differences between dimer and capsid.

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Year:  2002        PMID: 12269796     DOI: 10.1021/bi0261645

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  145 in total

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Authors:  Willem K Kegel; Paul van der Schoot Pv
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

2.  Exploring the paths of (virus) assembly.

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Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

3.  Understanding the concentration dependence of viral capsid assembly kinetics--the origin of the lag time and identifying the critical nucleus size.

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4.  Mechanisms of capsid assembly around a polymer.

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Journal:  Biophys J       Date:  2010-07-21       Impact factor: 4.033

5.  Synergistic Pleiotropy Overrides the Costs of Complexity in Viral Adaptation.

Authors:  Lindsey W McGee; Andrew M Sackman; Anneliese J Morrison; Jessica Pierce; Jeremy Anisman; Darin R Rokyta
Journal:  Genetics       Date:  2015-11-12       Impact factor: 4.562

6.  Tabulation as a high-resolution alternative to coarse-graining protein interactions: Initial application to virus capsid subunits.

Authors:  Justin Spiriti; Daniel M Zuckerman
Journal:  J Chem Phys       Date:  2015-12-28       Impact factor: 3.488

7.  Differential assembly of Hepatitis B Virus core protein on single- and double-stranded nucleic acid suggest the dsDNA-filled core is spring-loaded.

Authors:  Mary S Dhason; Joseph C-Y Wang; Michael F Hagan; Adam Zlotnick
Journal:  Virology       Date:  2012-05-16       Impact factor: 3.616

8.  Global structural changes in hepatitis B virus capsids induced by the assembly effector HAP1.

Authors:  Christina R Bourne; M G Finn; Adam Zlotnick
Journal:  J Virol       Date:  2006-08-30       Impact factor: 5.103

9.  Energetic cost of building a virus.

Authors:  Gita Mahmoudabadi; Ron Milo; Rob Phillips
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-16       Impact factor: 11.205

10.  Mechanisms of size control and polymorphism in viral capsid assembly.

Authors:  Oren M Elrad; Michael F Hagan
Journal:  Nano Lett       Date:  2008-10-25       Impact factor: 11.189

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