Literature DB >> 12242256

Enzyme kinetics, substitutable resources and competition: from biochemistry to frequency-dependent selection in lac.

Mark Lunzer1, Arvind Natarajan, Daniel E Dykhuizen, Antony M Dean.   

Abstract

Trade-offs in catalytic efficiency at the lac permease of Escherichia coli produce alleles with different substrate specializations that are selectively favored on different galactosides. We show that differential resource utilization during competition for mixtures of galactosides produces frequency-dependent selection at lac. However, the polymorphism is protected only in a narrow range of galactoside ratios despite intense selection on the pure galactosides. Hence, stabilizing frequency-dependent selection protecting natural allozyme polymorphisms through differential resource utilization will be sporadic and ephemeral in randomly changing environments. A comparison of predictions, based on first principles, with experimental outcomes reveals an additional, unanticipated source of weak selection.

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Year:  2002        PMID: 12242256      PMCID: PMC1462262     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  38 in total

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Authors:  W B Watt; A M Dean
Journal:  Annu Rev Genet       Date:  2000       Impact factor: 16.830

Review 2.  The nature of selection on the major histocompatibility complex.

Authors:  V Apanius; D Penn; P R Slev; L R Ruff; W K Potts
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Journal:  Proc Natl Acad Sci U S A       Date:  1968-10       Impact factor: 11.205

4.  Confidence interval for the number of selectively neutral amino acid polymorphisms.

Authors:  S A Sawyer; D E Dykhuizen; D L Hartl
Journal:  Proc Natl Acad Sci U S A       Date:  1987-09       Impact factor: 11.205

5.  Relative roles of mutation and selection in the maintenance of genetic variability.

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Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1988-07-06       Impact factor: 6.237

6.  Periodic selection, infectious gene exchange and the genetic structure of E. coli populations.

Authors:  B R Levin
Journal:  Genetics       Date:  1981-09       Impact factor: 4.562

7.  OmpF changes and the complexity of Escherichia coli adaptation to prolonged lactose limitation.

Authors:  E Zhang; T Ferenci
Journal:  FEMS Microbiol Lett       Date:  1999-07-15       Impact factor: 2.742

8.  Low synonymous site variation at the lacY locus in Escherichia coli suggests the action of positive selection.

Authors:  R R Wagner; M A Riley
Journal:  J Mol Evol       Date:  1996-02       Impact factor: 2.395

9.  A molecular investigation of genotype by environment interactions.

Authors:  A M Dean
Journal:  Genetics       Date:  1995-01       Impact factor: 4.562

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Authors:  P Boulanger; L Letellier
Journal:  J Biol Chem       Date:  1992-02-15       Impact factor: 5.157

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  24 in total

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2.  Protecting haploid polymorphisms in temporally variable environments.

Authors:  Antony M Dean
Journal:  Genetics       Date:  2004-11-15       Impact factor: 4.562

3.  Measuring selection coefficients below 10(-3): method, questions, and prospects.

Authors:  Romain Gallet; Tim F Cooper; Santiago F Elena; Thomas Lenormand
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Review 4.  Thoughts Toward a Theory of Natural Selection: The Importance of Microbial Experimental Evolution.

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Journal:  J Mol Evol       Date:  2005-08-02       Impact factor: 2.395

6.  Bounded population sizes, fluctuating selection and the tempo and mode of coexistence.

Authors:  Xiao Yi; Antony M Dean
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-27       Impact factor: 11.205

7.  SIZE DOESN'T MATTER: MICROBIAL SELECTION EXPERIMENTS ADDRESS ECOLOGICAL PHENOMENA.

Authors:  Michael Feldgarden; Daniel M Stoebel; Dustin Brisson; Daniel E Dykhuizen
Journal:  Ecology       Date:  2003-07       Impact factor: 5.499

Review 8.  Cancer in light of experimental evolution.

Authors:  Kathleen Sprouffske; Lauren M F Merlo; Philip J Gerrish; Carlo C Maley; Paul D Sniegowski
Journal:  Curr Biol       Date:  2012-09-11       Impact factor: 10.834

9.  How biochemical constraints of cellular growth shape evolutionary adaptations in metabolism.

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10.  Protozoan predation, diversifying selection, and the evolution of antigenic diversity in Salmonella.

Authors:  Hans Wildschutte; David M Wolfe; Aletheia Tamewitz; Jeffrey G Lawrence
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-09       Impact factor: 11.205

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