Literature DB >> 12241053

Modeling the energy transfer pathways. creatine kinase activities and heterogeneous distribution of ADP in the perfused heart.

F Joubert1, J A Hoerter, J L Mazet.   

Abstract

The exchange scheme of high energy phosphate transport in a whole heart relies on a system of CK functioning in different ways. This suggests that the CKs are able to act both like a shuttle and like a buffer for the energy transfer. The challenge is to understand how these two functions are balanced in the CK system. One key of this balance is the knowledge of the local concentrations of the ADP nucleotide. These concentrations cannot be directly measured, but they may be derived by computation. In the present report we introduce the known properties of the enzymes catalyzing the exchange of high energy phosphate into the model of flux pathways derived from NMR experiments to compute both the maximum activity of each enzyme and the local concentrations of all the substrates. We show that the ADP distribution must be heterogeneous for the system to work. Its concentration is 50% higher in the vicinity of ATPase sites and 50% lower in the intermembrane space of the mitochondria than in the cytosol. Another result of this analysis is that the apparent large unbalance of the CKmito pathway is imposed by the adenosine nucleotide transferase fluxes. This analysis proves that it is possible to deduce biochemistry the local concentrations of a substrate by combining data originating from NMR, and enzymology into a common model.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12241053     DOI: 10.1023/a:1020321711771

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  7 in total

1.  An extended dynamic model of oxidative phosphorylation.

Authors:  B Korzeniewski; W Froncisz
Journal:  Biochim Biophys Acta       Date:  1991-10-18

2.  Non-linear optimization of biochemical pathways: applications to metabolic engineering and parameter estimation.

Authors:  P Mendes; D Kell
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

3.  Biochemistry by numbers: simulation of biochemical pathways with Gepasi 3.

Authors:  P Mendes
Journal:  Trends Biochem Sci       Date:  1997-09       Impact factor: 13.807

4.  Inhibition of creatine kinase by chromium nucleotides.

Authors:  M I Schimerlik; W W Cleland
Journal:  J Biol Chem       Date:  1973-12-25       Impact factor: 5.157

5.  Discrimination of cardiac subcellular creatine kinase fluxes by NMR spectroscopy: a new method of analysis.

Authors:  F Joubert; J A Hoerter; J L Mazet
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

6.  GEPASI: a software package for modelling the dynamics, steady states and control of biochemical and other systems.

Authors:  P Mendes
Journal:  Comput Appl Biosci       Date:  1993-10

7.  Quantitative analysis of the 'phosphocreatine shuttle': I. A probability approach to the description of phosphocreatine production in the coupled creatine kinase-ATP/ADP translocase-oxidative phosphorylation reactions in heart mitochondria.

Authors:  M K Aliev; V A Saks
Journal:  Biochim Biophys Acta       Date:  1993-07-26
  7 in total
  8 in total

1.  Heterogeneity of ADP diffusion and regulation of respiration in cardiac cells.

Authors:  Valdur Saks; Andrey Kuznetsov; Tatiana Andrienko; Yves Usson; Florence Appaix; Karen Guerrero; Tuuli Kaambre; Peeter Sikk; Maris Lemba; Marko Vendelin
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

Review 2.  CK flux or direct ATP transfer: versatility of energy transfer pathways evidenced by NMR in the perfused heart.

Authors:  F Joubert; P Mateo; B Gillet; J C Beloeil; J L Mazet; J A Hoerter
Journal:  Mol Cell Biochem       Date:  2004 Jan-Feb       Impact factor: 3.396

Review 3.  On the origin of intracellular compartmentation and organized metabolic systems.

Authors:  Judit Ovádi; Valdur Saks
Journal:  Mol Cell Biochem       Date:  2004 Jan-Feb       Impact factor: 3.396

Review 4.  A comprehensive review of the bioenergetics of fatty acid and glucose metabolism in the healthy and failing heart in nondiabetic condition.

Authors:  Ashish Gupta; Brian Houston
Journal:  Heart Fail Rev       Date:  2017-11       Impact factor: 4.214

Review 5.  Energy metabolism in heart failure.

Authors:  Renée Ventura-Clapier; Anne Garnier; Vladimir Veksler
Journal:  J Physiol       Date:  2003-12-05       Impact factor: 5.182

Review 6.  Structural and functional adaptations of striated muscles to CK deficiency.

Authors:  R Ventura-Clapier; A Kaasik; V Veksler
Journal:  Mol Cell Biochem       Date:  2004 Jan-Feb       Impact factor: 3.396

7.  Creatine kinase overexpression improves ATP kinetics and contractile function in postischemic myocardium.

Authors:  Ashwin Akki; Jason Su; Toshiyuki Yano; Ashish Gupta; Yibin Wang; Michelle K Leppo; Vadappuram P Chacko; Charles Steenbergen; Robert G Weiss
Journal:  Am J Physiol Heart Circ Physiol       Date:  2012-08-10       Impact factor: 4.733

8.  Mitochondrial dynamics in the adult cardiomyocytes: which roles for a highly specialized cell?

Authors:  Jerome Piquereau; Fanny Caffin; Marta Novotova; Christophe Lemaire; Vladimir Veksler; Anne Garnier; Renee Ventura-Clapier; Frederic Joubert
Journal:  Front Physiol       Date:  2013-05-10       Impact factor: 4.566

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.