Literature DB >> 12239345

Classification of scale-free networks.

Kwang-Il Goh1, Eulsik Oh, Hawoong Jeong, Byungnam Kahng, Doochul Kim.   

Abstract

While the emergence of a power-law degree distribution in complex networks is intriguing, the degree exponent is not universal. Here we show that the between ness centrality displays a power-law distribution with an exponent eta, which is robust, and use it to classify the scale-free networks. We have observed two universality classes with eta approximately equal 2.2(1) and 2.0, respectively. Real-world networks for the former are the protein-interaction networks, the metabolic networks for eukaryotes and bacteria, and the coauthorship network, and those for the latter one are the Internet, the World Wide Web, and the metabolic networks for Archaea. Distinct features of the mass-distance relation, generic topology of geodesics, and resilience under attack of the two classes are identified. Various model networks also belong to either of the two classes, while their degree exponents are tunable.

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Year:  2002        PMID: 12239345      PMCID: PMC130503          DOI: 10.1073/pnas.202301299

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

1.  Genome evolution. Global methylation in eutherian hybrids.

Authors:  I Roemer; F Grützner; H Winking; T Haaf; A Orth; L Skidmore; D Antczak; R Fundele
Journal:  Nature       Date:  1999-09-09       Impact factor: 49.962

2.  Emergence of scaling in random networks

Authors: 
Journal:  Science       Date:  1999-10-15       Impact factor: 47.728

3.  Breakdown of the internet under intentional attack.

Authors:  R Cohen; K Erez; D ben-Avraham; S Havlin
Journal:  Phys Rev Lett       Date:  2001-04-16       Impact factor: 9.161

4.  Structure of growing networks with preferential linking.

Authors:  S N Dorogovtsev; J F Mendes; A N Samukhin
Journal:  Phys Rev Lett       Date:  2000-11-20       Impact factor: 9.161

5.  Resilience of the internet to random breakdowns

Authors: 
Journal:  Phys Rev Lett       Date:  2000-11-20       Impact factor: 9.161

6.  Universal behavior of load distribution in scale-free networks.

Authors:  K I Goh; B Kahng; D Kim
Journal:  Phys Rev Lett       Date:  2001-12-12       Impact factor: 9.161

7.  Lethality and centrality in protein networks.

Authors:  H Jeong; S P Mason; A L Barabási; Z N Oltvai
Journal:  Nature       Date:  2001-05-03       Impact factor: 49.962

8.  Geometric fractal growth model for scale-free networks.

Authors:  S Jung; S Kim; B Kahng
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2002-04-15

9.  Shortest paths and load scaling in scale-free trees.

Authors:  Gábor Szabó; Mikko Alava; János Kertész
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2002-08-07

10.  A comprehensive two-hybrid analysis to explore the yeast protein interactome.

Authors:  T Ito; T Chiba; R Ozawa; M Yoshida; M Hattori; Y Sakaki
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

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  42 in total

1.  Coauthorship networks and patterns of scientific collaboration.

Authors:  M E J Newman
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-26       Impact factor: 11.205

2.  Convergent evolution of gene networks by single-gene duplications in higher eukaryotes.

Authors:  Gregory D Amoutzias; David L Robertson; Stephen G Oliver; Erich Bornberg-Bauer
Journal:  EMBO Rep       Date:  2004-02-13       Impact factor: 8.807

Review 3.  Understanding protein non-folding.

Authors:  Vladimir N Uversky; A Keith Dunker
Journal:  Biochim Biophys Acta       Date:  2010-02-01

Review 4.  Complex networks and simple models in biology.

Authors:  Eric de Silva; Michael P H Stumpf
Journal:  J R Soc Interface       Date:  2005-12-22       Impact factor: 4.118

5.  Connectedness of PPI network neighborhoods identifies regulatory hub proteins.

Authors:  Andrew D Fox; Benjamin J Hescott; Anselm C Blumer; Donna K Slonim
Journal:  Bioinformatics       Date:  2011-03-02       Impact factor: 6.937

6.  Cluster Analysis of Medicinal Plants and Targets Based on Multipartite Network.

Authors:  Namgil Lee; Hojin Yoo; Heejung Yang
Journal:  Biomolecules       Date:  2021-04-08

7.  Scientific collaboration and endorsement: Network analysis of coauthorship and citation networks.

Authors:  Ying Ding
Journal:  J Informetr       Date:  2011-01-01       Impact factor: 5.107

8.  Power-law distribution of degree-degree distance: A better representation of the scale-free property of complex networks.

Authors:  Bin Zhou; Xiangyi Meng; H Eugene Stanley
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-15       Impact factor: 11.205

9.  Activity motifs reveal principles of timing in transcriptional control of the yeast metabolic network.

Authors:  Gal Chechik; Eugene Oh; Oliver Rando; Jonathan Weissman; Aviv Regev; Daphne Koller
Journal:  Nat Biotechnol       Date:  2008-11       Impact factor: 54.908

Review 10.  Quantitative analysis of cellular metabolic dissipative, self-organized structures.

Authors:  Ildefonso Martínez de la Fuente
Journal:  Int J Mol Sci       Date:  2010-09-27       Impact factor: 5.923

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