Literature DB >> 12237421

Genomic and phylogenetic analyses of an adenovirus isolated from a corn snake (Elaphe guttata) imply a common origin with members of the proposed new genus Atadenovirus.

Szilvia L Farkas1, Mária Benkő1, Péter Élő1, Krisztina Ursu2,1, Ádám Dán2,1, Winfried Ahne3, Balázs Harrach1.   

Abstract

Approximately 60% of the genome of an adenovirus isolated from a corn snake (Elaphe guttata) was cloned and sequenced. The results of homology searches showed that the genes of the corn snake adenovirus (SnAdV-1) were closest to their counterparts in members of the recently proposed new genus ATADENOVIRUS: In phylogenetic analyses of the complete hexon and protease genes, SnAdV-1 indeed clustered together with the atadenoviruses. The characteristic features in the genome organization of SnAdV-1 included the presence of a gene homologous to that for protein p32K, the lack of structural proteins V and IX and the absence of homologues of the E1A and E3 regions. These characteristics are in accordance with the genus-defining markers of atadenoviruses. Comparison of the cleavage sites of the viral protease in core protein pVII also confirmed SnAdV-1 as a candidate member of the genus ATADENOVIRUS: Thus, the hypothesis on the possible reptilian origin of atadenoviruses (Harrach, Acta Veterinaria Hungarica 48, 484-490, 2000) seems to be supported. However, the base composition of DNA sequence (>18 kb) determined from the SnAdV-1 genome showed an equilibrated GC content of 51%, which is unusual for an atadenovirus.

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Year:  2002        PMID: 12237421     DOI: 10.1099/0022-1317-83-10-2403

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


  17 in total

1.  Detection and analysis of six lizard adenoviruses by consensus primer PCR provides further evidence of a reptilian origin for the atadenoviruses.

Authors:  James F X Wellehan; April J Johnson; Balázs Harrach; Mária Benkö; Allan P Pessier; Calvin M Johnson; Michael M Garner; April Childress; Elliott R Jacobson
Journal:  J Virol       Date:  2004-12       Impact factor: 5.103

2.  Characterization of a new species of adenovirus in falcons.

Authors:  Mark Schrenzel; J Lindsay Oaks; Dave Rotstein; Gabriel Maalouf; Eric Snook; Cal Sandfort; Bruce Rideout
Journal:  J Clin Microbiol       Date:  2005-07       Impact factor: 5.948

Review 3.  Novel molecular approaches to cystic fibrosis gene therapy.

Authors:  Tim W R Lee; David A Matthews; G Eric Blair
Journal:  Biochem J       Date:  2005-04-01       Impact factor: 3.857

4.  Crystallization of the C-terminal domain of the fibre protein from snake adenovirus 1, an atadenovirus.

Authors:  Abhimanyu K Singh; Rosa Menéndez-Conejero; Carmen San Martín; Mark J van Raaij
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-11-29

5.  Whole genome molecular phylogeny of large dsDNA viruses using composition vector method.

Authors:  Lei Gao; Ji Qi
Journal:  BMC Evol Biol       Date:  2007-03-15       Impact factor: 3.260

6.  Host range, prevalence, and genetic diversity of adenoviruses in bats.

Authors:  Yan Li; Xingyi Ge; Huajun Zhang; Peng Zhou; Yan Zhu; Yunzhi Zhang; Junfa Yuan; Lin-Fa Wang; Zhengli Shi
Journal:  J Virol       Date:  2010-01-20       Impact factor: 5.103

7.  Whole-proteome phylogeny of large dsDNA viruses and parvoviruses through a composition vector method related to dynamical language model.

Authors:  Zu-Guo Yu; Ka Hou Chu; Chi Pang Li; Vo Anh; Li-Qian Zhou; Roger Wei Wang
Journal:  BMC Evol Biol       Date:  2010-06-22       Impact factor: 3.260

8.  Molecular characterization of a lizard adenovirus reveals the first atadenovirus with two fiber genes and the first adenovirus with either one short or three long fibers per penton.

Authors:  Judit J Pénzes; Rosa Menéndez-Conejero; Gabriela N Condezo; Inna Ball; Tibor Papp; Andor Doszpoly; Alberto Paradela; Ana J Pérez-Berná; María López-Sanz; Thanh H Nguyen; Mark J van Raaij; Rachel E Marschang; Balázs Harrach; Mária Benkő; Carmen San Martín
Journal:  J Virol       Date:  2014-07-23       Impact factor: 5.103

9.  Discovery and Characterization of Actively Replicating DNA and Retro-Transcribing Viruses in Lower Vertebrate Hosts Based on RNA Sequencing.

Authors:  Xin-Xin Chen; Wei-Chen Wu; Mang Shi
Journal:  Viruses       Date:  2021-05-31       Impact factor: 5.048

10.  Phylogenetic analyses of novel squamate adenovirus sequences in wild-caught Anolis lizards.

Authors:  Jill M Ascher; Anthony J Geneva; Julienne Ng; Jeffrey D Wyatt; Richard E Glor
Journal:  PLoS One       Date:  2013-04-10       Impact factor: 3.240

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