Literature DB >> 12236713

15N,(1)H Heteronuclear correlation NMR of gramicidin A in DMPC-d(67).

Christophe Farès1, Frances J Sharom, James H Davis.   

Abstract

We have studied gramicidin A, an environmentally sensitive polymorphic pentadecapeptide, fully 15N-labelled and dispersed in a highly deuterated phospholipid bilayer system. By submitting the sample to fast magic angle spinning, we were able to reduce the polypeptide amide hydrogen linewidths to 160 Hz, and hence to partially resolve them. By correlating these resonances with the 40 Hz wide dipolar coupled 15N in a 2D-CROPSY (cross-polarization spectroscopy) experiment, it was possible to observe the 20 partially overlapping 1H-15N signal pairs from the polypeptide backbone and sidechains. Both chemical shift distributions closely match those of the same peptide in SDS micelles, but only poorly match those of conformationally different gramicidin A in trifluoroethanol, dimethylsulfoxide, or methanol/chloroform mixture. Our results are indicative of the N-to-N right-handed beta6.3-helix conformation of gramicidin A and offer sufficient resolution to encourage development of experiments to measure orientational or distance restraints using through-space dipolar couplings.

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Year:  2002        PMID: 12236713     DOI: 10.1021/ja0264549

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  3 in total

1.  Gramicidin A backbone and side chain dynamics evaluated by molecular dynamics simulations and nuclear magnetic resonance experiments. II: nuclear magnetic resonance experiments.

Authors:  Vitaly V Vostrikov; Hong Gu; Helgi I Ingólfsson; James F Hinton; Olaf S Andersen; Benoît Roux; Roger E Koeppe
Journal:  J Phys Chem B       Date:  2011-05-16       Impact factor: 2.991

2.  Investigation of backbone dynamics and local geometry of bio-molecules using calculated NMR chemical shifts and anisotropies.

Authors:  Ulrich Sternberg; Raiker Witter
Journal:  J Biomol NMR       Date:  2019-10-23       Impact factor: 2.835

3.  High-resolution solid-state NMR of anisotropically mobile molecules under very low-power (1)H decoupling and moderate magic-angle spinning.

Authors:  Tim Doherty; Mei Hong
Journal:  J Magn Reson       Date:  2009-05-21       Impact factor: 2.229

  3 in total

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