Literature DB >> 12230995

Recommendations for consistent treatment of length variants in the human mitochondrial DNA control region.

Mark R Wilson1, Marc W Allard, Keith Monson, Kevin W P Miller, Bruce Budowle.   

Abstract

Human mitochondrial DNA (mtDNA) analysis is a valuable forensic tool, useful in cases where the amount of extracted DNA is low or highly degraded. Population databases are used to determine the relative rarity of a particular profile obtained in a forensic case. Rather than full DNA sequence information, sequence profiles are compared to a reference sequence, and the differences from the reference are recorded in forensic databases. A standard method is proposed for characterizing length variants, and examples are described using actual human control region mtDNA profiles. Consistency in alignment and nomenclature avoids inadvertently describing two sequences as different when in fact they are the same.

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Year:  2002        PMID: 12230995     DOI: 10.1016/s0379-0738(02)00206-2

Source DB:  PubMed          Journal:  Forensic Sci Int        ISSN: 0379-0738            Impact factor:   2.395


  16 in total

1.  Length heteroplasmy of the polyC-polyT-polyC stretch in the dog mtDNA control region.

Authors:  Sophie Verscheure; Thierry Backeljau; Stijn Desmyter
Journal:  Int J Legal Med       Date:  2014-11-14       Impact factor: 2.686

2.  Different methods to determine length heteroplasmy within the mitochondrial control region.

Authors:  Sabine Lutz-Bonengel; Timo Sänger; Stefan Pollak; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2004-10       Impact factor: 2.686

3.  Mitochondrial DNA control region sequences from Nairobi (Kenya): inferring phylogenetic parameters for the establishment of a forensic database.

Authors:  Anita Brandstätter; Christine T Peterson; Jodi A Irwin; Solomon Mpoke; Davy K Koech; Walther Parson; Thomas J Parsons
Journal:  Int J Legal Med       Date:  2004-10       Impact factor: 2.686

4.  Mitochondrial control region sequences from a Vietnamese population sample.

Authors:  Jodi A Irwin; Jessica L Saunier; Katherine M Strouss; Toni M Diegoli; Kimberly A Sturk; Jennifer E O'Callaghan; Carla D Paintner; Carsten Hohoff; Bernd Brinkmann; Thomas J Parsons
Journal:  Int J Legal Med       Date:  2007-10-25       Impact factor: 2.686

5.  Italian mitochondrial DNA database: results of a collaborative exercise and proficiency testing.

Authors:  Chiara Turchi; Loredana Buscemi; Carlo Previderè; Pierangela Grignani; Anita Brandstätter; Alessandro Achilli; Walther Parson; Adriano Tagliabracci
Journal:  Int J Legal Med       Date:  2007-10-20       Impact factor: 2.686

6.  Mitochondrial control region sequences from northern Greece and Greek Cypriots.

Authors:  Jodi Irwin; Jessica Saunier; Katharine Strouss; Carla Paintner; Toni Diegoli; Kimberly Sturk; Leda Kovatsi; Anita Brandstätter; Marios A Cariolou; Walther Parson; Thomas J Parsons
Journal:  Int J Legal Med       Date:  2007-05-11       Impact factor: 2.686

7.  Consistent treatment of length variants in the human mtDNA control region: a reappraisal.

Authors:  H-J Bandelt; W Parson
Journal:  Int J Legal Med       Date:  2007-03-09       Impact factor: 2.686

8.  Investigation of heteroplasmy in the human mitochondrial DNA control region: a synthesis of observations from more than 5000 global population samples.

Authors:  Jodi A Irwin; Jessica L Saunier; Harald Niederstätter; Katharine M Strouss; Kimberly A Sturk; Toni M Diegoli; Anita Brandstätter; Walther Parson; Thomas J Parsons
Journal:  J Mol Evol       Date:  2009-05-01       Impact factor: 2.395

9.  Haplotype diversity in mitochondrial DNA hypervariable region in a population of southeastern Brazil.

Authors:  C Fridman; R S Gonzalez; A C Pereira; M M S G Cardena
Journal:  Int J Legal Med       Date:  2014-05-21       Impact factor: 2.686

10.  Monitoring the inheritance of heteroplasmy by computer-assisted detection of mixed basecalls in the entire human mitochondrial DNA control region.

Authors:  Anita Brandstätter; Harald Niederstätter; Walther Parson
Journal:  Int J Legal Med       Date:  2004-01-09       Impact factor: 2.686

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