Literature DB >> 12225775

Observing structure, function and assembly of single proteins by AFM.

Daniel J Müller1, Harald Janovjak, Tiina Lehto, Lars Kuerschner, Kurt Anderson.   

Abstract

Single molecule experiments provide insight into the individuality of biological macromolecules, their unique function, reaction pathways, trajectories and molecular interactions. The exceptional signal-to-noise ratio of the atomic force microscope allows individual proteins to be imaged under physiologically relevant conditions at a lateral resolution of 0.5-1nm and a vertical resolution of 0.1-0.2nm. Recently, it has become possible to observe single molecule events using this technique. This capability is reviewed on various water-soluble and membrane proteins. Examples of the observation of function, variability, and assembly of single proteins are discussed. Statistical analysis is important to extend conclusions derived from single molecule experiments to protein species. Such approaches allow the classification of protein conformations and movements. Recent developments of probe microscopy techniques allow simultaneous measurement of multiple signals on individual macromolecules, and greatly extend the range of experiments possible for probing biological systems at the molecular level. Biologists exploring molecular mechanisms will benefit from a burgeoning of scanning probe microscopes and of their future combination with molecular biological experiments.

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Year:  2002        PMID: 12225775     DOI: 10.1016/s0079-6107(02)00009-3

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


  23 in total

1.  Hydrodynamic effects in fast AFM single-molecule force measurements.

Authors:  Harald Janovjak; Jens Struckmeier; Daniel J Müller
Journal:  Eur Biophys J       Date:  2004-07-15       Impact factor: 1.733

Review 2.  Sampling protein form and function with the atomic force microscope.

Authors:  Marian Baclayon; Wouter H Roos; Gijs J L Wuite
Journal:  Mol Cell Proteomics       Date:  2010-06-18       Impact factor: 5.911

3.  Proteomic analysis and purification of an unusual germin-like protein with proteolytic activity in the latex of Thevetia peruviana.

Authors:  Cleverson D T de Freitas; Wallace T da Cruz; Maria Z R Silva; Ilka M Vasconcelos; Frederico B M B Moreno; Renato A Moreira; Ana C O Monteiro-Moreira; Luciana M R Alencar; Jeanlex S Sousa; Bruno A M Rocha; Márcio V Ramos
Journal:  Planta       Date:  2016-01-21       Impact factor: 4.116

4.  Single-molecule enzymology of chymotrypsin using water-in-oil emulsion.

Authors:  Alan I Lee; James P Brody
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

5.  Force spectroscopy of single multidomain biopolymers: a master equation approach.

Authors:  O Braun; U Seifert
Journal:  Eur Phys J E Soft Matter       Date:  2005-09-20       Impact factor: 1.890

Review 6.  Characterizing folding, structure, molecular interactions and ligand gated activation of single sodium/proton antiporters.

Authors:  Alexej Kedrov; Daniel J Müller
Journal:  Naunyn Schmiedebergs Arch Pharmacol       Date:  2006-03-17       Impact factor: 3.000

Review 7.  Vertebrate membrane proteins: structure, function, and insights from biophysical approaches.

Authors:  Daniel J Müller; Nan Wu; Krzysztof Palczewski
Journal:  Pharmacol Rev       Date:  2008-03-05       Impact factor: 25.468

8.  Free energy of membrane protein unfolding derived from single-molecule force measurements.

Authors:  Johannes Preiner; Harald Janovjak; Christian Rankl; Helene Knaus; David A Cisneros; Alexej Kedrov; Ferry Kienberger; Daniel J Muller; Peter Hinterdorfer
Journal:  Biophys J       Date:  2007-05-04       Impact factor: 4.033

9.  Coarse-grained free energy functions for studying protein conformational changes: a double-well network model.

Authors:  Jhih-Wei Chu; Gregory A Voth
Journal:  Biophys J       Date:  2007-08-17       Impact factor: 4.033

10.  AFM visualization of mobile influenza A M2 molecules in planar bilayers.

Authors:  Travis Hughes; Bradley Strongin; Fei Philip Gao; Viksita Vijayvergiya; David D Busath; Robert C Davis
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

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