Literature DB >> 12204418

A simple method for the isolation of genomic DNA from mouse tail free of real-time PCR inhibitors.

Catherine A Burkhart1, Murray D Norris, Michelle Haber.   

Abstract

Although real-time PCR is a rapid, quantitative method for the analysis of gene and RNA levels, the presence of inhibitors in samples is an obstacle to its successful use. We have found that genomic DNA isolated from mouse tail tips using a standard proteinase K digestion method caused marked inhibition of real-time PCR. Inhibition was specific for mouse tail DNA since genomic DNA isolated from other tissue sources using the same methodology was readily amplified. We have therefore developed a nonproteinase K DNA isolation method involving the use of Chelex 100 resin. This method produces mouse tail DNA that is free of real-time PCR inhibitors.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12204418     DOI: 10.1016/s0165-022x(02)00052-0

Source DB:  PubMed          Journal:  J Biochem Biophys Methods        ISSN: 0165-022X


  9 in total

1.  Adverse effects of vapocoolant and topical anesthesia for tail biopsy of preweanling mice.

Authors:  Gillian C Braden; Angela K Brice; F Claire Hankenson
Journal:  J Am Assoc Lab Anim Sci       Date:  2015-05       Impact factor: 1.232

2.  Mechanisms of embryonal tumor initiation: distinct roles for MycN expression and MYCN amplification.

Authors:  Loen M Hansford; Wayne D Thomas; Joanna M Keating; Catherine A Burkhart; Anne E Peaston; Murray D Norris; Michelle Haber; Patricia J Armati; William A Weiss; Glenn M Marshall
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-16       Impact factor: 11.205

3.  Evaluation of tail biopsy collection in laboratory mice (Mus musculus): vertebral ossification, DNA quantity, and acute behavioral responses.

Authors:  F Claire Hankenson; Laura M Garzel; David D Fischer; Bonnie Nolan; Kurt D Hankenson
Journal:  J Am Assoc Lab Anim Sci       Date:  2008-11       Impact factor: 1.232

4.  Relevance of BAC transgene copy number in mice: transgene copy number variation across multiple transgenic lines and correlations with transgene integrity and expression.

Authors:  Kelly J Chandler; Ronald L Chandler; Eva M Broeckelmann; Yue Hou; E Michelle Southard-Smith; Douglas P Mortlock
Journal:  Mamm Genome       Date:  2007-09-20       Impact factor: 2.957

5.  N-terminal tagging of the dopamine transporter impairs protein expression and trafficking in vivo.

Authors:  Laura M Vecchio; M Kristel Bermejo; Pieter Beerepoot; Amy J Ramsey; Ali Salahpour
Journal:  Mol Cell Neurosci       Date:  2014-06-02       Impact factor: 4.314

6.  TRIzol and Alu qPCR-based quantification of metastatic seeding within the skeleton.

Authors:  J Preston Campbell; P Mulcrone; S K Masood; M Karolak; A Merkel; K Hebron; A Zijlstra; J Sterling; F Elefteriou
Journal:  Sci Rep       Date:  2015-08-14       Impact factor: 4.379

Review 7.  PCR inhibition in qPCR, dPCR and MPS-mechanisms and solutions.

Authors:  Maja Sidstedt; Peter Rådström; Johannes Hedman
Journal:  Anal Bioanal Chem       Date:  2020-02-12       Impact factor: 4.142

8.  A simple PCR method for rapid genotype analysis of the TH-MYCN transgenic mouse.

Authors:  Seiki Haraguchi; Akira Nakagawara
Journal:  PLoS One       Date:  2009-09-04       Impact factor: 3.240

9.  qPCR, dPCR, NGS - A journey.

Authors:  Jim F Huggett; Justin O'Grady; Stephen Bustin
Journal:  Biomol Detect Quantif       Date:  2015-01-15
  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.