Literature DB >> 12199289

GeneNest: automated generation and visualization of gene indices.

S A Haas1, T Beissbarth, E Rivals, A Krause, M Vingron.   

Abstract

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Year:  2000        PMID： 12199289     DOI： 10.1016/s0168-9525(00)02116-8

Source DB:  PubMed          Journal:  Trends Genet        ISSN： 0168-9525            Impact factor:   11.639


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  16 in total

1.  SYSTERS, GeneNest, SpliceNest: exploring sequence space from genome to protein.

Authors:  Antje Krause; Stefan A Haas; Eivind Coward; Martin Vingron
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

2.  An oligonucleotide fingerprint normalized and expressed sequence tag characterized zebrafish cDNA library.

Authors:  M D Clark; S Hennig; R Herwig; S W Clifton; M A Marra; H Lehrach; S L Johnson
Journal:  Genome Res       Date:  2001-09       Impact factor: 9.043

3.  CORG: a database for COmparative Regulatory Genomics.

Authors:  C Dieterich; H Wang; K Rateitschak; H Luz; M Vingron
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

4.  The Alternative Splicing Gallery (ASG): bridging the gap between genome and transcriptome.

Authors:  Jeremy Leipzig; Pavel Pevzner; Steffen Heber
Journal:  Nucleic Acids Res       Date:  2004-08-03       Impact factor: 16.971

5.  The multiassembly problem: reconstructing multiple transcript isoforms from EST fragment mixtures.

Authors:  Yi Xing; Alissa Resch; Christopher Lee
Journal:  Genome Res       Date:  2004-02-12       Impact factor: 9.043

6.  Identification and classification of differentially expressed genes in renal cell carcinoma by expression profiling on a global human 31,500-element cDNA array.

Authors:  J M Boer; W K Huber; H Sültmann; F Wilmer; A von Heydebreck; S Haas; B Korn; B Gunawan; A Vente; L Füzesi; M Vingron; A Poustka
Journal:  Genome Res       Date:  2001-11       Impact factor: 9.043

7.  Quantitative gene expression profiles in real time from expressed sequence tag databases.

Authors:  Vincent A Funari; Konstantin Voevodski; Dimitry Leyfer; Laura Yerkes; Donald Cramer; Dean R Tolan
Journal:  Gene Expr       Date:  2010

8.  Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments.

Authors:  Hugues Richard; Marcel H Schulz; Marc Sultan; Asja Nürnberger; Sabine Schrinner; Daniela Balzereit; Emilie Dagand; Axel Rasche; Hans Lehrach; Martin Vingron; Stefan A Haas; Marie-Laure Yaspo
Journal:  Nucleic Acids Res       Date:  2010-02-11       Impact factor: 16.971

9.  A computer-based method of selecting clones for a full-length cDNA project: simultaneous collection of negligibly redundant and variant cDNAs.

Authors:  Naoki Osato; Masayoshi Itoh; Hideaki Konno; Shinji Kondo; Kazuhiro Shibata; Piero Carninci; Toshiyuki Shiraki; Akira Shinagawa; Takahiro Arakawa; Shoshi Kikuchi; Kouji Sato; Jun Kawai; Yoshihide Hayashizaki
Journal:  Genome Res       Date:  2002-07       Impact factor: 9.043

10.  New evidence for genome-wide duplications at the origin of vertebrates using an amphioxus gene set and completed animal genomes.

Authors:  Georgia Panopoulou; Steffen Hennig; Detlef Groth; Antje Krause; Albert J Poustka; Ralf Herwig; Martin Vingron; Hans Lehrach
Journal:  Genome Res       Date:  2003-06       Impact factor: 9.043
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