Literature DB >> 12196517

Inhibitors of different structure induce distinguishing conformations in the omega loop, Cys69-Cys96, of mouse acetylcholinesterase.

Jianxin Shi1, Zoran Radic', Palmer Taylor.   

Abstract

We have shown previously that association of reversible active site ligands induces a conformational change in an omega loop (Omega loop), Cys(69)-Cys(96), of acetylcholinesterase. The fluorophore acrylodan, site-specifically incorporated at positions 76, 81, and 84, on the external portion of the loop not lining the active site gorge, shows changes in its fluorescence spectrum that reflect the fluorescent side chain moving from a hydrophobic environment to become more solvent-exposed. This appears to result from a movement of the Omega loop accompanying ligand binding. We show here that the loop is indeed flexible and responds to conformational changes induced by both active center and peripheral site inhibitors (gallamine and fasciculin). Moreover, phosphorylation and carbamoylation of the active center serine shows distinctive changes in acrylodan fluorescence spectra at the Omega loop sites, depending on the chirality and steric dimensions of the covalently conjugated ligand. Capping of the gorge with fasciculin, although it does not displace the bound ligand, dominates in inducing a conformational change in the loop. Hence, the ligand-induced conformational changes are distinctive and suggest multiple loop conformations accompany conjugation at the active center serine. The fluorescence changes induced by the modified enzyme may prove useful in the detection of organophosphates or exposure to cholinesterase inhibitors.

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Year:  2002        PMID: 12196517     DOI: 10.1074/jbc.M204391200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  9 in total

1.  Predicting flexible loop regions that interact with ligands: the challenge of accurate scoring.

Authors:  Matthew L Danielson; Markus A Lill
Journal:  Proteins       Date:  2011-11-09

2.  Structural insights into ligand interactions at the acetylcholinesterase peripheral anionic site.

Authors:  Yves Bourne; Palmer Taylor; Zoran Radić; Pascale Marchot
Journal:  EMBO J       Date:  2003-01-02       Impact factor: 11.598

3.  Acetylcholinesterase: converting a vulnerable target to a template for antidotes and detection of inhibitor exposure.

Authors:  Palmer Taylor; Zrinka Kovarik; Elsa Reiner; Zoran Radić
Journal:  Toxicology       Date:  2006-11-24       Impact factor: 4.221

4.  Protein complex formation by acetylcholinesterase and the neurotoxin fasciculin-2 appears to involve an induced-fit mechanism.

Authors:  Jennifer M Bui; J Andrew McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-04       Impact factor: 11.205

5.  Acetylcholinesterase active centre and gorge conformations analysed by combinatorial mutations and enantiomeric phosphonates.

Authors:  Zrinka Kovarik; Zoran Radić; Harvey A Berman; Vera Simeon-Rudolf; Elsa Reiner; Palmer Taylor
Journal:  Biochem J       Date:  2003-07-01       Impact factor: 3.857

6.  Understanding the enzyme-ligand complex: insights from all-atom simulations of butyrylcholinesterase inhibition.

Authors:  Walter Alvarado; Parker Ladd Bremer; Angela Choy; Helen N Dinh; Aingty Eung; Jeannette Gonzalez; Phillippe Ly; Trina Tran; Kensaku Nakayama; Jason P Schwans; Eric J Sorin
Journal:  J Biomol Struct Dyn       Date:  2019-04-07

7.  Freeze-frame inhibitor captures acetylcholinesterase in a unique conformation.

Authors:  Yves Bourne; Hartmuth C Kolb; Zoran Radić; K Barry Sharpless; Palmer Taylor; Pascale Marchot
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-02       Impact factor: 11.205

Review 8.  Limitations in current acetylcholinesterase structure-based design of oxime antidotes for organophosphate poisoning.

Authors:  Andrey Kovalevsky; Donald K Blumenthal; Xiaolin Cheng; Palmer Taylor; Zoran Radić
Journal:  Ann N Y Acad Sci       Date:  2016-07-02       Impact factor: 5.691

Review 9.  Computational Studies on Acetylcholinesterases.

Authors:  Yechun Xu; Shanmei Cheng; Joel L Sussman; Israel Silman; Hualiang Jiang
Journal:  Molecules       Date:  2017-08-10       Impact factor: 4.411

  9 in total

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