Literature DB >> 12193718

The IgH locus of the channel catfish, Ictalurus punctatus, contains multiple constant region gene sequences: different genes encode heavy chains of membrane and secreted IgD.

Eva Bengtén1, Sylvie M-A Quiniou, Tor B Stuge, Takayuki Katagiri, Norman W Miller, L William Clem, Gregory W Warr, Melanie Wilson.   

Abstract

The delta-chain of catfish IgD was initially characterized as a unique chimeric molecule containing a rearranged VDJ spliced to C micro 1, seven C domain-encoding exons (delta1-delta7), and a transmembrane tail. The presence of cDNA forms showing splicing of delta7 to an exon encoding a secretory tail was interpreted to indicate that membrane (deltam) and secreted (deltas) forms were likely expressed from a single gene by alternative RNA processing. Subsequent cloning and sequence analyses have unexpectedly revealed the presence of three delta C region genes, each linked to a micro gene or pseudogene. The first (IGHD1) is located 1.6 kb 3' of the functional C micro (IGHM1). The second (IGHD3) is positioned immediately downstream of a pseudo C micro (IGHM3P), approximately 725 kb 5' of IGHM1. These two delta genes are highly similar in sequence and each contains a tandem duplication of delta2-delta3-delta4. However, IGHD1 has a terminal exon encoding the transmembrane region, whereas IGHD3 has a single terminal exon encoding a secreted tail. The occurrence of IGHD3 immediately downstream of a micro pseudogene indicates that the putative deltas product may not be expressed as a chimeric micro delta molecule. Western blots and protein sequencing data indicate that an IGHD3-encoded protein is expressed in catfish serum. Thus, catfish deltam transcripts appear to originate from IGHD1, whereas deltas transcripts originate from IGHD3 rather than, as previously inferred, from a single expressed delta gene. The third delta (IGHD2) is associated with a pseudo C micro (IGHM2P); its presence is inferred by Southern blot analyses.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12193718     DOI: 10.4049/jimmunol.169.5.2488

Source DB:  PubMed          Journal:  J Immunol        ISSN: 0022-1767            Impact factor:   5.422


  32 in total

1.  Molecular characterization of immunoglobulin D in mammals: immunoglobulin heavy constant delta genes in dogs, chimpanzees and four old world monkey species.

Authors:  Kenneth A Rogers; Jennifer P Richardson; Franco Scinicariello; Roberta Attanasio
Journal:  Immunology       Date:  2006-05       Impact factor: 7.397

2.  Fugu immunoglobulin D: a highly unusual gene with unprecedented duplications in its constant region.

Authors:  Nil Ratan Saha; Hiroaki Suetake; Kiyoshi Kikuchi; Yuzuru Suzuki
Journal:  Immunogenetics       Date:  2004-08-26       Impact factor: 2.846

3.  Patterns of gene divergence and VL promoter activity in immunoglobulin light chain clusters of the channel catfish.

Authors:  Julia Cay Jones; Seyed H Ghaffari; Craig J Lobb
Journal:  Immunogenetics       Date:  2004-09-03       Impact factor: 2.846

Review 4.  New insights into the enigma of immunoglobulin D.

Authors:  Kang Chen; Andrea Cerutti
Journal:  Immunol Rev       Date:  2010-09       Impact factor: 12.988

Review 5.  Reconstructing immune phylogeny: new perspectives.

Authors:  Gary W Litman; John P Cannon; Larry J Dishaw
Journal:  Nat Rev Immunol       Date:  2005-11       Impact factor: 53.106

6.  Genomic organization of the channel catfish CD45 functional gene and CD45 pseudogenes.

Authors:  Evgueni Kountikov; Melanie Wilson; Sylvie Quiniou; Norman Miller; William Clem; Eva Bengtén
Journal:  Immunogenetics       Date:  2005-05-03       Impact factor: 2.846

Review 7.  The plasticity of immunoglobulin gene systems in evolution.

Authors:  Ellen Hsu; Nicolas Pulham; Lynn L Rumfelt; Martin F Flajnik
Journal:  Immunol Rev       Date:  2006-04       Impact factor: 12.988

8.  Structure of the catfish IGH locus: analysis of the region including the single functional IGHM gene.

Authors:  E Bengtén; S Quiniou; J Hikima; G Waldbieser; G W Warr; N W Miller; M Wilson
Journal:  Immunogenetics       Date:  2006-08-29       Impact factor: 2.846

9.  IgD, like IgM, is a primordial immunoglobulin class perpetuated in most jawed vertebrates.

Authors:  Yuko Ohta; Martin Flajnik
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-03       Impact factor: 11.205

10.  Genes of the constant regions of functional immunoglobulin heavy chain of Japanese flounder, Paralichthys olivaceus.

Authors:  Prapansak Srisapoome; Tsuyoshi Ohira; Ikuo Hirono; Takashi Aoki
Journal:  Immunogenetics       Date:  2004-07-08       Impact factor: 2.846

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.