Literature DB >> 12181338

Yarrowia lipolytica cells mutant for the PEX24 gene encoding a peroxisomal membrane peroxin mislocalize peroxisomal proteins and accumulate membrane structures containing both peroxisomal matrix and membrane proteins.

Yuen Yi C Tam1, Richard A Rachubinski.   

Abstract

Peroxins are proteins required for peroxisome assembly and are encoded by the PEX genes. Functional complementation of the oleic acid-nonutilizing strain mut1-1 of the yeast Yarrowia lipolytica has identified the novel gene, PEX24. PEX24 encodes Pex24p, a protein of 550 amino acids (61,100 Da). Pex24p is an integral membrane protein of peroxisomes that exhibits high sequence homology to two hypothetical proteins encoded by the open reading frames YHR150W and YDR479C of the Saccharomyces cerevisiae genome. Pex24p is detectable in wild-type cells grown in glucose-containing medium, and its levels are significantly increased by incubation of cells in oleic acid-containing medium, the metabolism of which requires intact peroxisomes. pex24 mutants are compromised in the targeting of both matrix and membrane proteins to peroxisomes. Although pex24 mutants fail to assemble functional peroxisomes, they do harbor membrane structures that contain subsets of peroxisomal proteins.

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Year:  2002        PMID: 12181338      PMCID: PMC117934          DOI: 10.1091/mbc.e02-02-0117

Source DB:  PubMed          Journal:  Mol Biol Cell        ISSN: 1059-1524            Impact factor:   4.138


  51 in total

Review 1.  The life cycle of the peroxisome.

Authors:  V I Titorenko; R A Rachubinski
Journal:  Nat Rev Mol Cell Biol       Date:  2001-05       Impact factor: 94.444

Review 2.  Protein import into peroxisomes and biogenesis of the organelle.

Authors:  S Subramani
Journal:  Annu Rev Cell Biol       Date:  1993

3.  Saccharomyces cerevisiae peroxisomal thiolase is imported as a dimer.

Authors:  J R Glover; D W Andrews; R A Rachubinski
Journal:  Proc Natl Acad Sci U S A       Date:  1994-10-25       Impact factor: 11.205

4.  The Pichia pastoris PAS4 gene encodes a ubiquitin-conjugating enzyme required for peroxisome assembly.

Authors:  D I Crane; J E Kalish; S J Gould
Journal:  J Biol Chem       Date:  1994-08-26       Impact factor: 5.157

5.  Antibodies directed against a yeast carboxyl-terminal peroxisomal targeting signal specifically recognize peroxisomal proteins from various yeasts.

Authors:  J D Aitchison; R K Szilard; W M Nuttley; R A Rachubinski
Journal:  Yeast       Date:  1992-09       Impact factor: 3.239

6.  Mutagenesis of the amino targeting signal of Saccharomyces cerevisiae 3-ketoacyl-CoA thiolase reveals conserved amino acids required for import into peroxisomes in vivo.

Authors:  J R Glover; D W Andrews; S Subramani; R A Rachubinski
Journal:  J Biol Chem       Date:  1994-03-11       Impact factor: 5.157

7.  The Yarrowia lipolytica gene PAY2 encodes a 42-kDa peroxisomal integral membrane protein essential for matrix protein import and peroxisome enlargement but not for peroxisome membrane proliferation.

Authors:  G A Eitzen; J D Aitchison; R K Szilard; M Veenhuis; W M Nuttley; R A Rachubinski
Journal:  J Biol Chem       Date:  1995-01-20       Impact factor: 5.157

8.  An internal region of the peroxisomal membrane protein PMP47 is essential for sorting to peroxisomes.

Authors:  M T McCammon; J A McNew; P J Willy; J M Goodman
Journal:  J Cell Biol       Date:  1994-03       Impact factor: 10.539

9.  An oligomeric protein is imported into peroxisomes in vivo.

Authors:  J A McNew; J M Goodman
Journal:  J Cell Biol       Date:  1994-12       Impact factor: 10.539

10.  The Hansenula polymorpha PER1 gene is essential for peroxisome biogenesis and encodes a peroxisomal matrix protein with both carboxy- and amino-terminal targeting signals.

Authors:  H R Waterham; V I Titorenko; P Haima; J M Cregg; W Harder; M Veenhuis
Journal:  J Cell Biol       Date:  1994-11       Impact factor: 10.539

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  14 in total

1.  Peroxisome biogenesis occurs in an unsynchronized manner in close association with the endoplasmic reticulum in temperature-sensitive Yarrowia lipolytica Pex3p mutants.

Authors:  Roger A Bascom; Honey Chan; Richard A Rachubinski
Journal:  Mol Biol Cell       Date:  2003-03       Impact factor: 4.138

2.  A combined approach of quantitative interaction proteomics and live-cell imaging reveals a regulatory role for endoplasmic reticulum (ER) reticulon homology proteins in peroxisome biogenesis.

Authors:  Christine David; Johannes Koch; Silke Oeljeklaus; Alexandra Laernsack; Sophie Melchior; Sebastian Wiese; Andreas Schummer; Ralf Erdmann; Bettina Warscheid; Cécile Brocard
Journal:  Mol Cell Proteomics       Date:  2013-05-20       Impact factor: 5.911

3.  Peroxins Pex30 and Pex29 Dynamically Associate with Reticulons to Regulate Peroxisome Biogenesis from the Endoplasmic Reticulum.

Authors:  Fred D Mast; Arvind Jamakhandi; Ramsey A Saleem; David J Dilworth; Richard S Rogers; Richard A Rachubinski; John D Aitchison
Journal:  J Biol Chem       Date:  2016-04-29       Impact factor: 5.157

Review 4.  Lipid droplets and peroxisomes: key players in cellular lipid homeostasis or a matter of fat--store 'em up or burn 'em down.

Authors:  Sepp D Kohlwein; Marten Veenhuis; Ida J van der Klei
Journal:  Genetics       Date:  2013-01       Impact factor: 4.562

Review 5.  Peroxisome biogenesis and inter-organelle communication: an indispensable role for Pex11 and Pex30 family proteins in yeast.

Authors:  Nayan Moni Deori; Shirisha Nagotu
Journal:  Curr Genet       Date:  2022-10-15       Impact factor: 2.695

6.  Pex11-related proteins in peroxisome dynamics: a role for the novel peroxin Pex27p in controlling peroxisome size and number in Saccharomyces cerevisiae.

Authors:  Yuen Yi C Tam; Juan C Torres-Guzman; Franco J Vizeacoumar; Jennifer J Smith; Marcello Marelli; John D Aitchison; Richard A Rachubinski
Journal:  Mol Biol Cell       Date:  2003-05-18       Impact factor: 4.138

7.  Tissue-selective, bidirectional regulation of PEX11 alpha and perilipin genes through a common peroxisome proliferator response element.

Authors:  Makoto Shimizu; Ayumi Takeshita; Toshiro Tsukamoto; Frank J Gonzalez; Takashi Osumi
Journal:  Mol Cell Biol       Date:  2004-02       Impact factor: 4.272

8.  Dysferlin domain-containing proteins, Pex30p and Pex31p, localized to two compartments, control the number and size of oleate-induced peroxisomes in Pichia pastoris.

Authors:  Mingda Yan; Dorian A Rachubinski; Saurabh Joshi; Richard A Rachubinski; Suresh Subramani
Journal:  Mol Biol Cell       Date:  2007-12-19       Impact factor: 4.138

9.  Pex30p, Pex31p, and Pex32p form a family of peroxisomal integral membrane proteins regulating peroxisome size and number in Saccharomyces cerevisiae.

Authors:  Franco J Vizeacoumar; Juan C Torres-Guzman; David Bouard; John D Aitchison; Richard A Rachubinski
Journal:  Mol Biol Cell       Date:  2003-11-14       Impact factor: 4.138

10.  Comparative Genomics of Peroxisome Biogenesis Proteins: Making Sense of the PEX Proteins.

Authors:  Renate L M Jansen; Carlos Santana-Molina; Marco van den Noort; Damien P Devos; Ida J van der Klei
Journal:  Front Cell Dev Biol       Date:  2021-05-20
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