Literature DB >> 12175492

The beta 3 tubulin gene is a direct target of bagpipe and biniou in the visceral mesoderm of Drosophila.

Stephane Zaffran1, Manfred Frasch.   

Abstract

Previous studies have identified the NK homeobox gene bagpipe and the FoxF fork head domain gene biniou as essential regulators of visceral mesoderm development in Drosophila. Here we present additional genetic and molecular information on the functions of these two genes during visceral mesoderm morphogenesis and differentiation. We show that both genes are required for the activation of beta 3Tub60D in the visceral mesoderm, which encodes beta 3 tubulin. We demonstrate that a 254 bp derivative of a previously defined visceral mesoderm-specific enhancer element, vm1, from beta 3Tub60D contains one specific in vitro binding site for Bagpipe and two such sites for Biniou. While the wild-type version of the 254 bp enhancer is able to drive significant levels of reporter gene expression within the entire trunk visceral mesoderm, mutation of either the Bagpipe or the Biniou binding sites within this element results in a severe decrease of enhancer activity. Moreover, mutation of all three binding sites for Bagpipe and Biniou, respectively, results in the complete loss of enhancer activity. Together, these observations suggest that Bagpipe and Biniou serve as direct, partially redundant, and tissue-specific activators of the terminal differentiation gene beta 3Tub60D in the visceral mesoderm. Copyright 2002 Elsevier Science Ireland Ltd.

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Year:  2002        PMID: 12175492     DOI: 10.1016/s0925-4773(02)00063-1

Source DB:  PubMed          Journal:  Mech Dev        ISSN: 0925-4773            Impact factor:   1.882


  8 in total

1.  Temporal ChIP-on-chip reveals Biniou as a universal regulator of the visceral muscle transcriptional network.

Authors:  Janus S Jakobsen; Martina Braun; Jeanette Astorga; E Hilary Gustafson; Thomas Sandmann; Michal Karzynski; Peter Carlsson; Eileen E M Furlong
Journal:  Genes Dev       Date:  2007-10-01       Impact factor: 11.361

2.  Uncoupling evolutionary changes in DNA sequence, transcription factor occupancy and enhancer activity.

Authors:  Pierre Khoueiry; Charles Girardot; Lucia Ciglar; Pei-Chen Peng; E Hilary Gustafson; Saurabh Sinha; Eileen Em Furlong
Journal:  Elife       Date:  2017-08-09       Impact factor: 8.140

3.  Identifying targets of multiple co-regulating transcription factors from expression time-series by Bayesian model comparison.

Authors:  Michalis K Titsias; Antti Honkela; Neil D Lawrence; Magnus Rattray
Journal:  BMC Syst Biol       Date:  2012-05-30

4.  A graphical modelling approach to the dissection of highly correlated transcription factor binding site profiles.

Authors:  Robert Stojnic; Audrey Qiuyan Fu; Boris Adryan
Journal:  PLoS Comput Biol       Date:  2012-11-08       Impact factor: 4.475

5.  Differential regulation of mesodermal gene expression by Drosophila cell type-specific Forkhead transcription factors.

Authors:  Xianmin Zhu; Shaad M Ahmad; Anton Aboukhalil; Brian W Busser; Yongsok Kim; Terese R Tansey; Adrian Haimovich; Neal Jeffries; Martha L Bulyk; Alan M Michelson
Journal:  Development       Date:  2012-02-29       Impact factor: 6.868

6.  Quantitative-enhancer-FACS-seq (QeFS) reveals epistatic interactions among motifs within transcriptional enhancers in developing Drosophila tissue.

Authors:  Colin T Waters; Stephen S Gisselbrecht; Yuliya A Sytnikova; Tiziana M Cafarelli; David E Hill; Martha L Bulyk
Journal:  Genome Biol       Date:  2021-12-20       Impact factor: 17.906

7.  Thermodynamics-based modeling reveals regulatory effects of indirect transcription factor-DNA binding.

Authors:  Shounak Bhogale; Saurabh Sinha
Journal:  iScience       Date:  2022-03-24

8.  Hand is a direct target of the forkhead transcription factor Biniou during Drosophila visceral mesoderm differentiation.

Authors:  Dmitry Popichenko; Julia Sellin; Marek Bartkuhn; Achim Paululat
Journal:  BMC Dev Biol       Date:  2007-05-18       Impact factor: 1.978

  8 in total

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