Literature DB >> 12174581

[Organization of the 378 bp satellite repeat in terminal heterochromatin of Allium fistulosum].

I A Fesenko1, L I Khrustaleva, G I Karlov.   

Abstract

Telomeres, DNA-protein structures, are important elements of the eukaryotic chromosome. Telomeric regions of the majority of higher plants contain heptanucleotides TTTAGGG arranged into a tandem repeat. However, some taxa have no such repeats. These are some species of lilies (Lilium) and onions (Allium). For example, terminal regions of chromosomes of Spanish onion (Allium fistulosum) contain satellite DNA whose unit repeats are 380 bp in length, and the short arm of its chromosome 8 contains rDNA repeats. This study deals with the terminal heterochromatin and organization of the satellite repeat in A. fistulosum. Fluorescent in situ hybridization (FISH) was used to locate the satellite DNA on chromosomes and on extended DNA of A. fistulosum. Nonsatellite DNA was found in the structure of telomeric repeat. Polymerase chain reaction (PCR) and Southern hybridization were used for analysis of terminal heterochromatin. Various rearrangements were found in the satellite repeat. The roles of retrotransposones and microsatellites in the formation of terminal heterochromatin are discussed.

Entities:  

Mesh:

Substances:

Year:  2002        PMID: 12174581

Source DB:  PubMed          Journal:  Genetika        ISSN: 0016-6758


  4 in total

1.  Tandem repeats of Allium fistulosum associated with major chromosomal landmarks.

Authors:  Ilya V Kirov; Anna V Kiseleva; Katrijn Van Laere; Nadine Van Roy; Ludmila I Khrustaleva
Journal:  Mol Genet Genomics       Date:  2017-02-01       Impact factor: 3.291

2.  Chromosome dynamics visualized with an anti-centromeric histone H3 antibody in Allium.

Authors:  Kiyotaka Nagaki; Maki Yamamoto; Naoki Yamaji; Yasuhiko Mukai; Minoru Murata
Journal:  PLoS One       Date:  2012-12-07       Impact factor: 3.240

3.  Karyotype analysis of eight cultivated Allium species.

Authors:  Farzaneh Pordel Maragheh; Daniel Janus; Magdalena Senderowicz; Kamil Haliloglu; Bozena Kolano
Journal:  J Appl Genet       Date:  2018-10-23       Impact factor: 3.240

4.  Functional Allium fistulosum Centromeres Comprise Arrays of a Long Satellite Repeat, Insertions of Retrotransposons and Chloroplast DNA.

Authors:  Ilya Kirov; Sergey Odintsov; Murad Omarov; Sofya Gvaramiya; Pavel Merkulov; Maxim Dudnikov; Alexey Ermolaev; Katrijn Van Laere; Alexander Soloviev; Ludmila Khrustaleva
Journal:  Front Plant Sci       Date:  2020-10-23       Impact factor: 5.753

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.