Literature DB >> 12174044

Characterization of a repetitive element polymorphism-polymerase chain reaction chromosomal marker that discriminates Bacillus anthracis from related species.

A Cherif1, S Borin, A Rizzi, H Ouzari, A Boudabous, D Daffonchio.   

Abstract

AIMS: To identify a chromosomal marker with signature nucleotides specific for Bacillus anthracis. METHODS AND
RESULTS: Repetitive element polymorphism-polymerase chain reaction with BOX-A1R primer was used to discriminate 52 strains of all six species of the 'B. cereus group'. A B. anthracis signature fragment, named AC-390, was cloned and sequenced. The deduced amino acid sequence was homologous to that of YwfK of B. subtilis. Using two internal primers, the AC-390 fragment was sequenced from two other B. anthracis strains as well as from strains of B. cereus and B.thuringiensis which have an AC-390 fragment homologous to that of B. anthracis as shown by Southern hybridization experiments.
CONCLUSIONS: Two new signature sequences specific for B. anthracis were identified on a chromosomal fragment homologous to YwfK, a transcriptional regulator of B. subtilis. SIGNIFICANCE AND IMPACT OF THE STUDY: These results show a new chromosomal DNA trait useful for distinguishing B. anthracis from the related species of the B. cereus group, regardless of the presence of the virulence plasmids pXO1 and pXO2.

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Year:  2002        PMID: 12174044     DOI: 10.1046/j.1365-2672.2002.01712.x

Source DB:  PubMed          Journal:  J Appl Microbiol        ISSN: 1364-5072            Impact factor:   3.772


  8 in total

1.  Diversity of Bacillus anthracis strains in Georgia and of vaccine strains from the former Soviet Union.

Authors:  Maya Merabishvili; Merab Natidze; Sergo Rigvava; Lorenzo Brusetti; Noura Raddadi; Sara Borin; Nina Chanishvili; Marina Tediashvili; Richard Sharp; Maurizio Barbeschi; Paolo Visca; Daniele Daffonchio
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

2.  In silico and in vitro evaluation of PCR-based assays for the detection of Bacillus anthracis chromosomal signature sequences.

Authors:  Joakim Ågren; Raditijo A Hamidjaja; Trine Hansen; Robin Ruuls; Simon Thierry; Håkan Vigre; Ingmar Janse; Anders Sundström; Bo Segerman; Miriam Koene; Charlotta Löfström; Bart Van Rotterdam; Sylviane Derzelle
Journal:  Virulence       Date:  2013-09-09       Impact factor: 5.882

3.  Development of SCAR primers based on a repetitive DNA fingerprint for Escherichia coli detection.

Authors:  Aphidech Sangdee; Sitakan Natphosuk; Adunwit Srisathan; Kusavadee Sangdee
Journal:  J Microbiol       Date:  2013-03-02       Impact factor: 3.422

4.  Discrimination of Bacillus anthracis and closely related microorganisms by analysis of 16S and 23S rRNA with oligonucleotide microarray.

Authors:  Sergei G Bavykin; Vladimir M Mikhailovich; Vladimir M Zakharyev; Yuri P Lysov; John J Kelly; Oleg S Alferov; Igor M Gavin; Alexander V Kukhtin; Joany Jackman; David A Stahl; Darrell Chandler; Andrei D Mirzabekov
Journal:  Chem Biol Interact       Date:  2007-09-12       Impact factor: 5.192

5.  Strategy for identification of Bacillus cereus and Bacillus thuringiensis strains closely related to Bacillus anthracis.

Authors:  Daniele Daffonchio; Noura Raddadi; Maya Merabishvili; Ameur Cherif; Lorenzo Carmagnola; Lorenzo Brusetti; Aurora Rizzi; Nina Chanishvili; Paolo Visca; Richard Sharp; Sara Borin
Journal:  Appl Environ Microbiol       Date:  2006-02       Impact factor: 4.792

6.  Genetic and biochemical diversity of Paenibacillus larvae isolated from Tunisian infected honey bee broods.

Authors:  Chadlia Hamdi; Jihène Essanaa; Luigi Sansonno; Elena Crotti; Khaoula Abdi; Naima Barbouche; Annalisa Balloi; Elena Gonella; Alberto Alma; Daniele Daffonchio; Abdellatif Boudabous; Ameur Cherif
Journal:  Biomed Res Int       Date:  2013-09-02       Impact factor: 3.411

7.  Thermophilic bacteria in Moroccan hot springs, salt marshes and desert soils.

Authors:  Tarik Aanniz; Mouna Ouadghiri; Marouane Melloul; Jean Swings; Elmostafa Elfahime; Jamal Ibijbijen; Mohamed Ismaili; Mohamed Amar
Journal:  Braz J Microbiol       Date:  2015-06-01       Impact factor: 2.476

8.  Duplex Electrochemical DNA Sensor to Detect Bacillus anthracis CAP and PAG DNA Targets Based on the Incorporation of Tailed Primers and Ferrocene-Labeled dATP.

Authors:  Ivan Magriñá; Miriam Jauset-Rubio; Mayreli Ortiz; Herbert Tomaso; Anna Simonova; Michal Hocek; Ciara K O'Sullivan
Journal:  ACS Omega       Date:  2019-12-11
  8 in total

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