Literature DB >> 12172852

Characterization of the peach homologue of the ethylene receptor, PpETR1, reveals some unusual features regarding transcript processing.

Carole L Bassett1, Timothy S Artlip, Ann M Callahan.   

Abstract

To identify which processes in peach, Prunus persica [L.] Batsch., are associated with changes in ethylene perception, we cloned and characterized a peach homologue of the gene encoding the ethylene receptor, ETR1. A fragment of the peach gene, PpETR1, obtained via PCR using degenerate primers against peach genomic DNA was used to screen a cDNA library made from ripening fruit. The resulting cDNA and subsequent 3' RACE clones indicate that the PpETR1 coding region is highly similar to other ETR1 homologues. However, the mRNA undergoes unusual alternative splicing that potentially results in three different mature transcripts. Use of an alternative 3' splice site to remove the last intron in PpETR1a results in a polypeptide that is missing three amino acids within the receiver-like domain. Retention of the terminal intron occurs in PpETR1b, which, if translated, would result in a truncated protein lacking a receiver-like domain. Fruit from three cultivars with substantially different ripening times were examined from 7 to 130 days after bloom using RT-PCR to characterize expression of the intron-retaining and fully spliced mRNAs. There were only slight differences in the abundance of these mRNAs among cultivars during fruit development; however, one of the slow-ripening cultivars showed a substantial increase in expression of the unspliced mRNA in pre-climacteric fruit. Variations in PpETR1 transcript abundance in wounding experiments indicate that the properly spliced and unspliced versions have different accumulation patterns in fruit, whereas both are essentially constitutive in leaves. These observations indicate that changes in ethylene sensitivity may occur during wounding in fruit.

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Year:  2002        PMID: 12172852     DOI: 10.1007/s00425-002-0797-2

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  10 in total

1.  Comparative expression and transcript initiation of three peach dehydrin genes.

Authors:  Carole Leavel Bassett; Michael E Wisniewski; Timothy S Artlip; Greg Richart; John L Norelli; Robert E Farrell
Journal:  Planta       Date:  2009-04-10       Impact factor: 4.116

2.  Noncanonical Alternative Polyadenylation Contributes to Gene Regulation in Response to Hypoxia.

Authors:  Laura de Lorenzo; Reed Sorenson; Julia Bailey-Serres; Arthur G Hunt
Journal:  Plant Cell       Date:  2017-05-30       Impact factor: 11.277

3.  Characterization and genetic analysis of an EIN4-like sequence (CaETR-1) located in QTL(AR1) implicated in ascochyta blight resistance in chickpea.

Authors:  E Madrid; P N Rajesh; J Rubio; J Gil; T Millán; W Chen
Journal:  Plant Cell Rep       Date:  2012-01-12       Impact factor: 4.570

4.  How ethylene works in the reproductive organs of higher plants: a signaling update from the third millennium.

Authors:  Francisco De la Torre; María Del Carmen Rodríguez-Gacio; Angel J Matilla
Journal:  Plant Signal Behav       Date:  2006-09

5.  Characterization of wound-responsive RNA-binding proteins and their splice variants in Arabidopsis.

Authors:  Jérôme Bove; Cha Young Kim; Caroline A Gibson; Sarah M Assmann
Journal:  Plant Mol Biol       Date:  2008-02-16       Impact factor: 4.076

6.  Cloning and sequence analysis of a low temperature-induced gene from trifoliate orange with unusual pre-mRNA processing.

Authors:  Y Jia; H S del Rio; A L Robbins; E S Louzada
Journal:  Plant Cell Rep       Date:  2004-05-12       Impact factor: 4.570

7.  The pentratricopeptide repeat protein DELAYED GREENING1 is involved in the regulation of early chloroplast development and chloroplast gene expression in Arabidopsis.

Authors:  Wei Chi; Jinfang Ma; Dongyuan Zhang; Jinkui Guo; Fan Chen; Congming Lu; Lixin Zhang
Journal:  Plant Physiol       Date:  2008-04-09       Impact factor: 8.340

8.  Molecular characterization of an ethylene receptor gene (CcETR1) in coffee trees, its relationship with fruit development and caffeine content.

Authors:  José Bustamante-Porras; Claudine Campa; Valérie Poncet; Michel Noirot; Thierry Leroy; Serge Hamon; Alexandre de Kochko
Journal:  Mol Genet Genomics       Date:  2007-02-21       Impact factor: 2.980

9.  The importance of being divisible by three in alternative splicing.

Authors:  Alon Magen; Gil Ast
Journal:  Nucleic Acids Res       Date:  2005-09-28       Impact factor: 16.971

10.  Genome-wide determination of poly(A) sites in Medicago truncatula: evolutionary conservation of alternative poly(A) site choice.

Authors:  Xiaohui Wu; Bobby Gaffney; Arthur G Hunt; Qingshun Q Li
Journal:  BMC Genomics       Date:  2014-07-21       Impact factor: 3.969

  10 in total

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