Literature DB >> 12169677

IgH PCR of zinc formalin-fixed, paraffin-embedded non-lymphomatous gastric samples produces artifactual "clonal" bands not observed in paired tissues unexposed to zinc formalin.

Kim Ahrens1, Raul Braylan, Nidal Almasri, Robin Foss, Lisa Rimsza.   

Abstract

Helicobacter pylori (HP) causes dense gastritis that can be difficult to distinguish morphologically from MALT-type lymphoma (ML). Immunoglobulin heavy chain (IgH) gene analysis by polymerase chain reaction (PCR) is often used to resolve diagnosis. However, monoclonal bands have been reported in nonmalignant cases of gastritis. Retrospectively, 16 gastric ML with both formalin-fixed, paraffin-embedded (FF-PE) and ethanol-fixed samples (EF), and 9 cases of FF-PE HP-gastritis were analyzed by IgH PCR to document the presence of non-reproducible bands in HP-gastritis, but not ML samples. In duplicate analyses, 12 of 16 ML yielded identical monoclonal bands in FF-PE and EF samples whereas 3 of 9 FF-PE gastritis cases yielded different-sized (ie, non-reproducible) "clonal" bands. Sequencing of two PCR products from a gastritis case confirmed IgH gene sequences. To investigate whether FF-PE had a direct effect on producing these non-reproducible bands, 7 gastrectomy samples were prospectively divided into EF and FF-PE halves for IgH PCR. All 7 samples demonstrated polyclonal smears in EF portions while 4 of 7 FF-PE portions yielded either multiple distinct bands or non-reproducible bands. In conclusion, IgH PCR of FF-PE tissue can create artifactual "clonal" bands, which are the appropriate product size, contain IgH sequences, and, if not performed in duplicate, may confuse interpretation of B-cell clonality.

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Year:  2002        PMID: 12169677      PMCID: PMC1906984          DOI: 10.1016/S1525-1578(10)60697-6

Source DB:  PubMed          Journal:  J Mol Diagn        ISSN: 1525-1578            Impact factor:   5.568


  25 in total

1.  PCR analysis of the immunoglobulin heavy chain gene in polyclonal processes can yield pseudoclonal bands as an artifact of low B cell number.

Authors:  K S Elenitoba-Johnson; S D Bohling; R S Mitchell; M S Brown; R S Robetorye
Journal:  J Mol Diagn       Date:  2000-05       Impact factor: 5.568

2.  Gene rearrangement in B- and T-lymphoproliferative disease detected by the polymerase chain reaction.

Authors:  K J Trainor; M J Brisco; J H Wan; S Neoh; S Grist; A A Morley
Journal:  Blood       Date:  1991-07-01       Impact factor: 22.113

3.  A simple salting out procedure for extracting DNA from human nucleated cells.

Authors:  S A Miller; D D Dykes; H F Polesky
Journal:  Nucleic Acids Res       Date:  1988-02-11       Impact factor: 16.971

4.  Eradication of Helicobacter pylori and stability of remissions in low-grade gastric B-cell lymphomas of the mucosa-associated lymphoid tissue: results of an ongoing multicenter trial.

Authors:  C Thiede; T Wündisch; B Neubauer; B Alpen; A Morgner; M Ritter; G Ehninger; M Stolte; E Bayerdörffer; A Neubauer
Journal:  Recent Results Cancer Res       Date:  2000

5.  The role of the endoscopic biopsy in the diagnosis of gastric lymphoma: a morphologic and immunohistochemical reappraisal.

Authors:  J Arista-Nasr; A Jimenez; C Keirns; O Larraza; J Larriva-Sahd
Journal:  Hum Pathol       Date:  1991-04       Impact factor: 3.466

6.  Hodgkin's disease with a B-cell phenotype often shows a VDJ rearrangement and somatic mutations in the VH genes.

Authors:  J Tamaru; M Hummel; M Zemlin; B Kalvelage; H Stein
Journal:  Blood       Date:  1994-08-01       Impact factor: 22.113

7.  Lymphoid infiltrates of the stomach. Evaluation of histologic criteria for the diagnosis of low-grade gastric lymphoma on endoscopic biopsy specimens.

Authors:  L R Zukerberg; J A Ferry; J F Southern; N L Harris
Journal:  Am J Surg Pathol       Date:  1990-12       Impact factor: 6.394

8.  Detection of monoclonality in low-grade B-cell lymphomas using the polymerase chain reaction is dependent on primer selection and lymphoma type.

Authors:  T C Diss; H Peng; A C Wotherspoon; P G Isaacson; L Pan
Journal:  J Pathol       Date:  1993-03       Impact factor: 7.996

9.  Regression of primary low-grade B-cell gastric lymphoma of mucosa-associated lymphoid tissue type after eradication of Helicobacter pylori.

Authors:  A C Wotherspoon; C Doglioni; T C Diss; L Pan; A Moschini; M de Boni; P G Isaacson
Journal:  Lancet       Date:  1993-09-04       Impact factor: 79.321

10.  Improved PCR method for detecting monoclonal immunoglobulin heavy chain rearrangement in B cell neoplasms.

Authors:  I Ramasamy; M Brisco; A Morley
Journal:  J Clin Pathol       Date:  1992-09       Impact factor: 3.411

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  3 in total

1.  Limited tissue fixation times and whole genomic amplification do not impact array CGH profiles.

Authors:  A A Ghazani; N C R Arneson; K Warren; S J Done
Journal:  J Clin Pathol       Date:  2006-03       Impact factor: 3.411

2.  Analysis of T-cell clonality using laser capture microdissection and high-resolution microcapillary electrophoresis.

Authors:  Evgeny Yakirevich; Cynthia L Jackson; Patricia A Meitner; Dolores MacKenzie; Rose Tavares; Leslie Robinson-Bostom; Ronald A DeLellis; Murray B Resnick
Journal:  J Mol Diagn       Date:  2007-07-09       Impact factor: 5.568

Review 3.  Malleable immunoglobulin genes and hematopathology - the good, the bad, and the ugly: a paper from the 2007 William Beaumont hospital symposium on molecular pathology.

Authors:  Adam Bagg
Journal:  J Mol Diagn       Date:  2008-08-07       Impact factor: 5.568

  3 in total

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