Literature DB >> 12167163

Clamp and clamp loader structures of the human checkpoint protein complexes, Rad9-1-1 and Rad17-RFC.

Yasushi Shiomi1, Ayako Shinozaki, Daisuke Nakada, Katsunori Sugimoto, Jiro Usukura, Chikashi Obuse, Toshiki Tsurimoto.   

Abstract

BACKGROUND: We have reported that protein imaging by transmission electron microscope observation based on low-angle platinum shadowing can reproduce characteristic ring structures of the replication clamp, proliferating cell nuclear antigen (PCNA), and the clamp loader protein, replication factor C (RFC). The checkpoint protein complexes, Rad9-Hus1-Rad1 (Rad9-1-1) and Rad17-RFCs2-5 (Rad17-RFC), have been predicted to function as novel clamp and clamp loader proteins, respectively, due to their amino acid sequence similarities with PCNA and RFC.
RESULTS: We reconstituted human Rad9-1-1 and Rad17-RFC complexes in insect cells using a baculovirus expression system and showed purified Rad9-1-1 to be composed of equimolar amounts of Rad9, Hus1 and Rad1 proteins, exhibiting a native molecular mass of 100 kDa, in line with a trimeric complex. When Rad17 was co-expressed with the four small subunits of RFC in insect cells, these proteins formed a complex of 240 kDa that displayed DNA binding, ATPase activity and binding to its predicted target protein, Rad9-1-1. Analyses of the molecular architecture of Rad9-1-1 and Rad17-RFC using transmission electron microscopy, in comparison with PCNA and RFC, revealed the Rad9-1-1 complex to have a characteristic ring structure indistinguishable from that of PCNA in shape and size. In addition, the Rad17-RFC complex was found to be oval in structure and 26 x 22 nm in size with a cleft, reminiscent of the structure of RFC.
CONCLUSION: Our direct comparison of images from the two sets of clamp and clamp loader proteins indicated that Rad9-1-1 and Rad17-RFC are, respectively, structural orthologs of PCNA and RFC, with presumed functions as novel clamp and clamp-loader proteins in eukaryotes.

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Year:  2002        PMID: 12167163     DOI: 10.1046/j.1365-2443.2002.00566.x

Source DB:  PubMed          Journal:  Genes Cells        ISSN: 1356-9597            Impact factor:   1.891


  33 in total

1.  Targeted deletion of mouse Rad1 leads to deficient cellular DNA damage responses.

Authors:  Chunbo Zhang; Yuheng Liu; Zhishang Hu; Lili An; Yikun He; Haiying Hang
Journal:  Protein Cell       Date:  2011-06-02       Impact factor: 14.870

2.  Loading of the human 9-1-1 checkpoint complex onto DNA by the checkpoint clamp loader hRad17-replication factor C complex in vitro.

Authors:  Vladimir P Bermudez; Laura A Lindsey-Boltz; Anthony J Cesare; Yoshimasa Maniwa; Jack D Griffith; Jerard Hurwitz; Aziz Sancar
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-10       Impact factor: 11.205

3.  Retention but not recruitment of Crb2 at double-strand breaks requires Rad1 and Rad3 complexes.

Authors:  Li-Lin Du; Toru M Nakamura; Bettina A Moser; Paul Russell
Journal:  Mol Cell Biol       Date:  2003-09       Impact factor: 4.272

Review 4.  Regulation of the DNA replication fork: a way to fight genomic instability.

Authors:  Magali Toueille; Ulrich Hübscher
Journal:  Chromosoma       Date:  2004-08-06       Impact factor: 4.316

5.  The human Rad9/Rad1/Hus1 damage sensor clamp interacts with DNA polymerase beta and increases its DNA substrate utilisation efficiency: implications for DNA repair.

Authors:  Magali Toueille; Nazim El-Andaloussi; Isabelle Frouin; Raimundo Freire; Dorothee Funk; Igor Shevelev; Erica Friedrich-Heineken; Giuseppe Villani; Michael O Hottiger; Ulrich Hübscher
Journal:  Nucleic Acids Res       Date:  2004-06-22       Impact factor: 16.971

6.  Mus81-Mms4 functions as a single heterodimer to cleave nicked intermediates in recombinational DNA repair.

Authors:  Erin K Schwartz; William D Wright; Kirk T Ehmsen; James E Evans; Henning Stahlberg; Wolf-Dietrich Heyer
Journal:  Mol Cell Biol       Date:  2012-05-29       Impact factor: 4.272

7.  Jab1 mediates protein degradation of the Rad9-Rad1-Hus1 checkpoint complex.

Authors:  Jin Huang; Honglin Yuan; Chongyuan Lu; Ximeng Liu; Xu Cao; Mei Wan
Journal:  J Mol Biol       Date:  2007-06-04       Impact factor: 5.469

8.  Structures of monomeric, dimeric and trimeric PCNA: PCNA-ring assembly and opening.

Authors:  Vladena Hlinkova; Guangxin Xing; Jacob Bauer; Yoon Jung Shin; Isabelle Dionne; Kanagalaghatta R Rajashankar; Stephen D Bell; Hong Ling
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2008-08-13

9.  Interaction of apurinic/apyrimidinic endonuclease 2 (Apn2) with Myh1 DNA glycosylase in fission yeast.

Authors:  Jin Jin; Bor-Jang Hwang; Po-Wen Chang; Eric A Toth; A-Lien Lu
Journal:  DNA Repair (Amst)       Date:  2014-02-01

10.  The 9-1-1 DNA clamp is required for immunoglobulin gene conversion.

Authors:  Alihossein Saberi; Makoto Nakahara; Julian E Sale; Koji Kikuchi; Hiroshi Arakawa; Jean-Marie Buerstedde; Kenichi Yamamoto; Shunichi Takeda; Eiichiro Sonoda
Journal:  Mol Cell Biol       Date:  2008-07-28       Impact factor: 4.272

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