Literature DB >> 12163644

Transition to the open state of the TolC periplasmic tunnel entrance.

Christian Andersen1, Eva Koronakis, Evert Bokma, Jeyanthy Eswaran, Daniel Humphreys, Colin Hughes, Vassilis Koronakis.   

Abstract

The TolC channel-tunnel spans the bacterial outer membrane and periplasm, providing a large exit duct for protein export and multidrug efflux when recruited by substrate-engaged inner membrane complexes. The sole constriction in the single pore of the homotrimeric TolC is the periplasmic tunnel entrance, which in its resting configuration is closed by dense packing of the 12 tunnel-forming alpha-helices. Recruitment of TolC must trigger opening for substrate transit to occur, but the mechanism underlying transition from the closed to the open state is not known. The high resolution structure of TolC indicates that the tunnel helices are constrained at the entrance by a circular network of intra- and intermonomer hydrogen bonds and salt bridges. To assess how opening is achieved, we disrupted these connections and monitored changes in the aperture size by measuring the single channel conductance of TolC derivatives in black lipid bilayers. Elimination of individual connections caused incremental weakening of the circular network, accompanied by gradual relaxation from the closed state and increased flexibility of the entrance. Simultaneous abolition of the key links caused a substantial increase in conductance, generating an aperture that corresponds to the modeled open state, with the capacity to allow access and passage of diverse substrates. The results support a model in which transition to the open state of TolC is achieved by an iris-like realignment of the tunnel entrance helices.

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Year:  2002        PMID: 12163644      PMCID: PMC123217          DOI: 10.1073/pnas.162039399

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  Alignment and structure prediction of divergent protein families: periplasmic and outer membrane proteins of bacterial efflux pumps.

Authors:  J M Johnson; G M Church
Journal:  J Mol Biol       Date:  1999-04-02       Impact factor: 5.469

Review 2.  Multiple antibiotic resistance and efflux.

Authors:  H Nikaido
Journal:  Curr Opin Microbiol       Date:  1998-10       Impact factor: 7.934

3.  Crystal structure of the bacterial membrane protein TolC central to multidrug efflux and protein export.

Authors:  V Koronakis; A Sharff; E Koronakis; B Luisi; C Hughes
Journal:  Nature       Date:  2000-06-22       Impact factor: 49.962

Review 4.  Multiple pathways allow protein secretion across the bacterial outer membrane.

Authors:  D G Thanassi; S J Hultgren
Journal:  Curr Opin Cell Biol       Date:  2000-08       Impact factor: 8.382

Review 5.  alpha-Hemolysin from Staphylococcus aureus: an archetype of beta-barrel, channel-forming toxins.

Authors:  E Gouaux
Journal:  J Struct Biol       Date:  1998       Impact factor: 2.867

6.  Structure of staphylococcal alpha-hemolysin, a heptameric transmembrane pore.

Authors:  L Song; M R Hobaugh; C Shustak; S Cheley; H Bayley; J E Gouaux
Journal:  Science       Date:  1996-12-13       Impact factor: 47.728

7.  Structure of TolC, the outer membrane component of the bacterial type I efflux system, derived from two-dimensional crystals.

Authors:  V Koronakis; J Li; E Koronakis; K Stauffer
Journal:  Mol Microbiol       Date:  1997-02       Impact factor: 3.501

Review 8.  Prevention of drug access to bacterial targets: permeability barriers and active efflux.

Authors:  H Nikaido
Journal:  Science       Date:  1994-04-15       Impact factor: 47.728

9.  TolC of Escherichia coli functions as an outer membrane channel.

Authors:  R Benz; E Maier; I Gentschev
Journal:  Zentralbl Bakteriol       Date:  1993-04

10.  Substrate-induced assembly of a contiguous channel for protein export from E.coli: reversible bridging of an inner-membrane translocase to an outer membrane exit pore.

Authors:  T Thanabalu; E Koronakis; C Hughes; V Koronakis
Journal:  EMBO J       Date:  1998-11-16       Impact factor: 11.598

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  52 in total

1.  Development and Evaluation of CmeC Subunit Vaccine against Campylobacter jejuni.

Authors:  Ximin Zeng; Fuzhou Xu; Jun Lin
Journal:  J Vaccines Vaccin       Date:  2010-01-01

2.  Sequential mechanism of assembly of multidrug efflux pump AcrAB-TolC.

Authors:  Elena B Tikhonova; Yoichi Yamada; Helen I Zgurskaya
Journal:  Chem Biol       Date:  2011-04-22

Review 3.  Structure and function of efflux pumps that confer resistance to drugs.

Authors:  M Ines Borges-Walmsley; Kenneth S McKeegan; Adrian R Walmsley
Journal:  Biochem J       Date:  2003-12-01       Impact factor: 3.857

4.  Structure of the periplasmic component of a bacterial drug efflux pump.

Authors:  Matthew K Higgins; Evert Bokma; Eva Koronakis; Colin Hughes; Vassilis Koronakis
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-28       Impact factor: 11.205

5.  Colicin occlusion of OmpF and TolC channels: outer membrane translocons for colicin import.

Authors:  Stanislav D Zakharov; Veronika Y Eroukova; Tatyana I Rokitskaya; Mariya V Zhalnina; Onkar Sharma; Patrick J Loll; Helen I Zgurskaya; Yuri N Antonenko; William A Cramer
Journal:  Biophys J       Date:  2004-10-01       Impact factor: 4.033

6.  Flexibility in a drug transport accessory protein: molecular dynamics simulations of MexA.

Authors:  Loredana Vaccaro; Vassilis Koronakis; Mark S P Sansom
Journal:  Biophys J       Date:  2006-04-28       Impact factor: 4.033

7.  Isolation and characterization of VceC gain-of-function mutants that can function with the AcrAB multiple-drug-resistant efflux pump of Escherichia coli.

Authors:  Govindsamy Vediyappan; Tatyana Borisova; Joe A Fralick
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

8.  Conformational flexibility in the multidrug efflux system protein AcrA.

Authors:  Jonathan Mikolosko; Kostyantyn Bobyk; Helen I Zgurskaya; Partho Ghosh
Journal:  Structure       Date:  2006-03       Impact factor: 5.006

9.  Transitions between closed and open conformations of TolC: the effects of ions in simulations.

Authors:  Robert Schulz; Ulrich Kleinekathöfer
Journal:  Biophys J       Date:  2009-04-22       Impact factor: 4.033

10.  AcrAB-TolC directs efflux-mediated multidrug resistance in Salmonella enterica serovar typhimurium DT104.

Authors:  Sylvie Baucheron; Shaun Tyler; David Boyd; Michael R Mulvey; Elisabeth Chaslus-Dancla; Axel Cloeckaert
Journal:  Antimicrob Agents Chemother       Date:  2004-10       Impact factor: 5.191

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