Literature DB >> 12161745

3-Methyladenine DNA glycosylase I is an unexpected helix-hairpin-helix superfamily member.

Alexander C Drohat1, Keehwan Kwon, Daniel J Krosky, James T Stivers.   

Abstract

The Escherichia coli enzyme 3-methyladenine DNA glycosylase I (TAG) hydrolyzes the glycosidic bond of 3-methyladenine (3-MeA) in DNA and is found in many bacteria and some higher eukaryotes. TAG shows little primary sequence identity with members of the well-known helix-hairpin-helix (HhH) superfamily of DNA repair glycosylases, which consists of AlkA, EndoIII, MutY and hOGG1. Unexpectedly, the three-dimensional solution structure reported here reveals TAG as member of this superfamily. The restricted specificity of TAG for 3-MeA bases probably arises from its unique aromatic rich 3-MeA binding pocket and the absence of a catalytic aspartate that is present in all other HhH family members.

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Year:  2002        PMID: 12161745     DOI: 10.1038/nsb829

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  18 in total

1.  Mismatch repair in methylated DNA. Structure and activity of the mismatch-specific thymine glycosylase domain of methyl-CpG-binding protein MBD4.

Authors:  Peiying Wu; Chen Qiu; Anjum Sohail; Xing Zhang; Ashok S Bhagwat; Xiaodong Cheng
Journal:  J Biol Chem       Date:  2002-11-26       Impact factor: 5.157

2.  An unprecedented nucleic acid capture mechanism for excision of DNA damage.

Authors:  Emily H Rubinson; A S Prakasha Gowda; Thomas E Spratt; Barry Gold; Brandt F Eichman
Journal:  Nature       Date:  2010-10-03       Impact factor: 49.962

3.  Crystal structures of 3-methyladenine DNA glycosylase MagIII and the recognition of alkylated bases.

Authors:  Brandt F Eichman; Eyleen J O'Rourke; J Pablo Radicella; Tom Ellenberger
Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

4.  Structural basis for the interaction of Escherichia coli NusA with protein N of phage lambda.

Authors:  Irena Bonin; Rene Mühlberger; Gleb P Bourenkov; Robert Huber; Adelbert Bacher; Gerald Richter; Markus C Wahl
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-13       Impact factor: 11.205

5.  Frameshift mutagenesis and microsatellite instability induced by human alkyladenine DNA glycosylase.

Authors:  Joanna Klapacz; Gondichatnahalli M Lingaraju; Haiwei H Guo; Dharini Shah; Ayelet Moar-Shoshani; Lawrence A Loeb; Leona D Samson
Journal:  Mol Cell       Date:  2010-03-26       Impact factor: 17.970

6.  DNA damage recognition and repair by 3-methyladenine DNA glycosylase I (TAG).

Authors:  Audrey H Metz; Thomas Hollis; Brandt F Eichman
Journal:  EMBO J       Date:  2007-04-05       Impact factor: 11.598

Review 7.  Recent advances in the structural mechanisms of DNA glycosylases.

Authors:  Sonja C Brooks; Suraj Adhikary; Emily H Rubinson; Brandt F Eichman
Journal:  Biochim Biophys Acta       Date:  2012-10-14

Review 8.  Base excision repair.

Authors:  Hans E Krokan; Magnar Bjørås
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-04-01       Impact factor: 10.005

9.  Repair of 3-methylthymine and 1-methylguanine lesions by bacterial and human AlkB proteins.

Authors:  Pål Ø Falnes
Journal:  Nucleic Acids Res       Date:  2004-12-01       Impact factor: 16.971

10.  Depurination of N7-methylguanine by DNA glycosylase AlkD is dependent on the DNA backbone.

Authors:  Emily H Rubinson; Plamen P Christov; Brandt F Eichman
Journal:  Biochemistry       Date:  2013-10-07       Impact factor: 3.162

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