Literature DB >> 12160700

Use of frozen-hydrated axonemes to assess imaging parameters and resolution limits in cryoelectron tomography.

Bruce F McEwen1, Michael Marko, Chyong-Ere Hsieh, Carmen Mannella.   

Abstract

Using a 400-kV cryoelectron microscope, we have obtained tomographic reconstructions of frozen-hydrated sea urchin axonemes with 8-10-nm resolution, as assessed by detection of characteristic components including doublet microtubules, radial spokes, central sheath projections, and outer dynein arms. We did not detect the inner dynein arms or the microtubule lattice. The 1/(8 nm) and 1/(16 nm) layer lines are consistently present in power spectra of both projection images and tomographic reconstructions. Strength and detection of the layer lines are dependent upon total electron dose and defocus. Both layer lines are surprisingly resistant to electron doses of up to 11000 electrons/nm(2). We present a summary of resolution considerations in cryoelectron tomography and conclude that the fundamental limitation is the total electron dose required for statistical significance. The electron dose can be fractionated among the numerous angular views in a tomographic data set, but there is an unavoidable fourth-power dependence of total dose on target resolution. Since higher-resolution features are more beam-sensitive, this dose requirement places an ultimate limit on the resolution of individual tomographic reconstructions. Instrumental and computational strategies to circumvent this limitation are discussed.

Entities:  

Mesh:

Year:  2002        PMID: 12160700     DOI: 10.1016/s1047-8477(02)00020-5

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  9 in total

1.  Native cellular architecture of Treponema denticola revealed by cryo-electron tomography.

Authors:  Jacques Izard; Chyong-Ere Hsieh; Ronald J Limberger; Carmen A Mannella; Michael Marko
Journal:  J Struct Biol       Date:  2008-03-28       Impact factor: 2.867

2.  Preparing samples from whole cells using focused-ion-beam milling for cryo-electron tomography.

Authors:  Felix R Wagner; Reika Watanabe; Ruud Schampers; Digvijay Singh; Hans Persoon; Miroslava Schaffer; Peter Fruhstorfer; Jürgen Plitzko; Elizabeth Villa
Journal:  Nat Protoc       Date:  2020-05-13       Impact factor: 13.491

3.  The outer plate in vertebrate kinetochores is a flexible network with multiple microtubule interactions.

Authors:  Yimin Dong; Kristin J Vanden Beldt; Xing Meng; Alexey Khodjakov; Bruce F McEwen
Journal:  Nat Cell Biol       Date:  2007-04-15       Impact factor: 28.824

Review 4.  Actin filaments as tension sensors.

Authors:  Vitold E Galkin; Albina Orlova; Edward H Egelman
Journal:  Curr Biol       Date:  2012-02-07       Impact factor: 10.834

5.  Effect of fringe-artifact correction on sub-tomogram averaging from Zernike phase-plate cryo-TEM.

Authors:  Gregory P Kishchenko; Radostin Danev; Rebecca Fisher; Jie He; Chyongere Hsieh; Michael Marko; Haixin Sui
Journal:  J Struct Biol       Date:  2015-07-22       Impact factor: 2.867

6.  Cryo-electron tomography elucidates the molecular architecture of Treponema pallidum, the syphilis spirochete.

Authors:  Jacques Izard; Christian Renken; Chyong-Ere Hsieh; Daniel C Desrosiers; Star Dunham-Ems; Carson La Vake; Linda L Gebhardt; Ronald J Limberger; David L Cox; Michael Marko; Justin D Radolf
Journal:  J Bacteriol       Date:  2009-10-09       Impact factor: 3.490

7.  The flat-ribbon configuration of the periplasmic flagella of Borrelia burgdorferi and its relationship to motility and morphology.

Authors:  Nyles W Charon; Stuart F Goldstein; Michael Marko; Chyongere Hsieh; Linda L Gebhardt; M Abdul Motaleb; Charles W Wolgemuth; Ronald J Limberger; Nancy Rowe
Journal:  J Bacteriol       Date:  2008-11-14       Impact factor: 3.490

8.  Cryo-electron tomography of motile cilia and flagella.

Authors:  Takashi Ishikawa
Journal:  Cilia       Date:  2015-02-02

9.  A cylindrical specimen holder for electron cryo-tomography.

Authors:  Colin M Palmer; Jan Löwe
Journal:  Ultramicroscopy       Date:  2013-11-13       Impact factor: 2.689

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.