Literature DB >> 12153721

Molecular cloning and characterization of a novel glucocerebrosidase of Paenibacillus sp. TS12.

Tomomi Sumida1, Noriyuki Sueyoshi, Makoto Ito.   

Abstract

We report here the molecular cloning and characterization of a glucocerebrosidase [EC 3.2.1.45] from Paenibacillus sp. TS12. The open reading frame of the glucocerebrosidase gene consisted of 2,493 bp nucleotides and encoded 831 amino acid residues. The enzyme exhibited no sequence similarity with a classical glucocerebrosidase belonging to glycoside hydrolase (GH) family 30, but rather showed significant similarity with GH family 3 beta-glucosidases from Clostridium thermocellum, Ruminococcus albus, and Aspergillus aculeateus. The recombinant enzyme, expressed in Escherichia coli BL21(DE3)pLysS, had a molecular weight of 90.7 kDa and hydrolyzed NBD-labeled glucosylceramide, but not galactosylceramide, GM1a or sphingomyelin. The enzyme was most active at pH 6.5, and its apparent Km and Vmax values for NBD-labeled glucosylceramide and p-nitrophenyl-beta-glucopyranoside were 223 microM and 1.60 micromol/min/mg of protein, and 593 microM and 112 micromol/min/mg of protein, respectively. Site-directed mutagenesis indicated that Asp-223 is an essential amino acid for the catalytic reaction and possibly functions a catalytic nucleophile, as in GH family 3 beta-glucosidases. This is the first report of the molecular cloning and characterization of a glucocerebrosidase from a procaryote.

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Year:  2002        PMID: 12153721     DOI: 10.1093/oxfordjournals.jbchem.a003216

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  8 in total

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2.  Paenibacillus sp. TS12 glucosylceramidase: kinetic studies of a novel sub-family of family 3 glycosidases and identification of the catalytic residues.

Authors:  Krisztina Paal; Makoto Ito; Stephen G Withers
Journal:  Biochem J       Date:  2004-02-15       Impact factor: 3.857

3.  Overexpression and characterization of a Ca(2+) activated thermostable β-glucosidase with high ginsenoside Rb1 to ginsenoside 20(S)-Rg3 bioconversion productivity.

Authors:  Jingcong Xie; Dongxia Zhao; Linguo Zhao; Jianjun Pei; Wei Xiao; Gang Ding; Zhenzhong Wang
Journal:  J Ind Microbiol Biotechnol       Date:  2015-04-03       Impact factor: 3.346

4.  Utilization of ganglioside-degrading Paenibacillus sp. strain TS12 for production of glucosylceramide.

Authors:  Tomomi Sumida; Noriyuki Sueyoshi; Makoto Ito
Journal:  Appl Environ Microbiol       Date:  2002-11       Impact factor: 4.792

5.  Molecular cloning and catalytic mechanism of a novel glycosphingolipid-degrading beta-N-acetylgalactosaminidase from Paenibacillus sp. TS12.

Authors:  Tomomi Sumida; Ken Fujimoto; Makoto Ito
Journal:  J Biol Chem       Date:  2011-02-05       Impact factor: 5.157

6.  Characterization of a cold-active β-glucosidase from Paenibacillus xylanilyticus KJ-03 capable of hydrolyzing isoflavones daidzin and genistin.

Authors:  Dong-Ju Park; Yong-Suk Lee; Yong-Lark Choi
Journal:  Protein J       Date:  2013-10       Impact factor: 2.371

7.  Biochemical analysis of a beta-D-xylosidase and a bifunctional xylanase-ferulic acid esterase from a xylanolytic gene cluster in Prevotella ruminicola 23.

Authors:  Dylan Dodd; Svetlana A Kocherginskaya; M Ashley Spies; Kyle E Beery; Charles A Abbas; Roderick I Mackie; Isaac K O Cann
Journal:  J Bacteriol       Date:  2009-03-20       Impact factor: 3.490

8.  Purification, gene cloning, and biochemical characterization of a β-glucosidase capable of hydrolyzing sesaminol triglucoside from Paenibacillus sp. KB0549.

Authors:  Arun Nair; Akika Kuwahara; Akihiro Nagase; Haruhiko Yamaguchi; Tatsuya Yamazaki; Miho Hosoya; Ayano Omura; Kunio Kiyomoto; Masa-Atsu Yamaguchi; Takefumi Shimoyama; Seiji Takahashi; Toru Nakayama
Journal:  PLoS One       Date:  2013-04-10       Impact factor: 3.240

  8 in total

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