Literature DB >> 12150943

Comparative genome analysis of potential regulatory elements in the ABCG5-ABCG8 gene cluster.

Alan T Remaley1, Samantha Bark, Avram D Walts, Lita Freeman, Sergey Shulenin, Tarmo Annilo, Eric Elgin, Hope E Rhodes, Charles Joyce, Michael Dean, Silvia Santamarina-Fojo, H Bryan Brewer.   

Abstract

The excretion of sterols from the liver and intestine is regulated by the ABCG5 and ABCG8 transporters. To identify potential regulatory elements, 152 kb of the human ABCG5-ABCG8 gene cluster was sequenced and comparative genome analysis was performed. The two genes are oriented in a head-to-head configuration and are separated by a 374-bp intergenic region, which is highly conserved among several species. Using a reporter construct, the intergenic region was found to act as a bidirectional promoter. A conserved GATA site in the intergenic region was shown by site-directed mutagenesis to act as a repressor for the ABCG5 promoter. The intergenic region was also shown to be partially responsive to treatment by LXR agonists. In summary, several potential regulatory elements were found for the ABCG5 and ABCG8 genes, and the intergenic region was found to act as a bidirectional promoter.

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Year:  2002        PMID: 12150943     DOI: 10.1016/s0006-291x(02)00652-6

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  11 in total

1.  A proximal tissue-specific module and a distal negative regulatory module control apolipoprotein(a) gene transcription.

Authors:  Sarita Negi; Saurabh K Singh; Nirupma Pati; Vikas Handa; Ruchi Chauhan; Uttam Pati
Journal:  Biochem J       Date:  2004-04-01       Impact factor: 3.857

Review 2.  ATP-binding cassette, subfamily G (ABCG family).

Authors:  Hiroyuki Kusuhara; Yuichi Sugiyama
Journal:  Pflugers Arch       Date:  2006-09-16       Impact factor: 3.657

3.  Cooperative interaction between hepatocyte nuclear factor 4 alpha and GATA transcription factors regulates ATP-binding cassette sterol transporters ABCG5 and ABCG8.

Authors:  Koichi Sumi; Toshiya Tanaka; Aoi Uchida; Kenta Magoori; Yasuyo Urashima; Riuko Ohashi; Hiroto Ohguchi; Masashi Okamura; Hiromi Kudo; Kenji Daigo; Takashi Maejima; Noriaki Kojima; Iori Sakakibara; Shuying Jiang; Go Hasegawa; Insook Kim; Timothy F Osborne; Makoto Naito; Frank J Gonzalez; Takao Hamakubo; Tatsuhiko Kodama; Juro Sakai
Journal:  Mol Cell Biol       Date:  2007-04-02       Impact factor: 4.272

Review 4.  ABCG5 and ABCG8: more than a defense against xenosterols.

Authors:  Shailendra B Patel; Gregory A Graf; Ryan E Temel
Journal:  J Lipid Res       Date:  2018-05-04       Impact factor: 5.922

5.  Hepatic insulin resistance directly promotes formation of cholesterol gallstones.

Authors:  Sudha B Biddinger; Joel T Haas; Bian B Yu; Olivier Bezy; Enxuan Jing; Wenwei Zhang; Terry G Unterman; Martin C Carey; C Ronald Kahn
Journal:  Nat Med       Date:  2008-06-29       Impact factor: 53.440

6.  Down-regulation of hepatic and intestinal Abcg5 and Abcg8 expression associated with altered sterol fluxes in rats with streptozotocin-induced diabetes.

Authors:  V W Bloks; W M Bakker-Van Waarde; H J Verkade; I P Kema; H Wolters; E Vink; A K Groen; F Kuipers
Journal:  Diabetologia       Date:  2003-11-14       Impact factor: 10.122

7.  Two non-homologous brain diseases-related genes, SERPINI1 and PDCD10, are tightly linked by an asymmetric bidirectional promoter in an evolutionarily conserved manner.

Authors:  Ping-Yen Chen; Wun-Shaing W Chang; Ruey-Hwang Chou; Yiu-Kay Lai; Sheng-Chieh Lin; Chia-Yi Chi; Cheng-Wen Wu
Journal:  BMC Mol Biol       Date:  2007-01-09       Impact factor: 2.946

8.  Genome-wide analysis of the ATP-binding cassette (ABC) transporter gene family in sea lamprey and Japanese lamprey.

Authors:  Jianfeng Ren; Yu-Wen Chung-Davidson; Chu-Yin Yeh; Camille Scott; Titus Brown; Weiming Li
Journal:  BMC Genomics       Date:  2015-06-06       Impact factor: 3.969

9.  Cooperative transcriptional activation of ATP-binding cassette sterol transporters ABCG5 and ABCG8 genes by nuclear receptors including Liver-X-Receptor.

Authors:  Su Sun Back; Jinsu Kim; Daehyung Choi; Eui Sup Lee; Soo Young Choi; Kyuhyung Han
Journal:  BMB Rep       Date:  2013-06       Impact factor: 4.778

10.  Functional Cooperativity between ABCG4 and ABCG1 Isoforms.

Authors:  Zoltán Hegyi; László Homolya
Journal:  PLoS One       Date:  2016-05-26       Impact factor: 3.240

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