Literature DB >> 12147132

Analyzing gene regulation in ascidian embryos: new tools for new perspectives.

Anna Di Gregorio1, Michael Levine.   

Abstract

Ascidians are marine protochordates at the evolutionary boundary between invertebrates and vertebrates. Ascidian larvae provide a simple system for unraveling gene regulation networks underlying the formation of the basic chordate body plan. After being used for over a century as a model for embryological studies, ascidians have become, in the past decade, an increasingly popular organism for studying gene regulation. Part of the renewed appeal of this system is the use of electroporation to introduce transgenic DNAs into developing embryos. This method is considerably more efficient than conventional microinjection assays and permits the simultaneous transformation of hundreds of embryos. Electroporation has allowed the identification and characterization of cis-regulatory DNAs that mediate gene expression in a variety of tissues, including the notochord, tail muscles, CNS, and endoderm. Electroporation has also provided a simple method for misexpressing patterning genes and producing dominant mutant phenotypes. Recent studies have used electroporation to create "knock-out" phenotypes by overexpressing dominant negative forms of particular proteins. Here we review the past and present uses of electroporation in ascidian development, and speculate on potential future uses.

Mesh:

Year:  2002        PMID: 12147132     DOI: 10.1046/j.1432-0436.2002.700402.x

Source DB:  PubMed          Journal:  Differentiation        ISSN: 0301-4681            Impact factor:   3.880


  17 in total

1.  Germ-line transgenesis of the Tc1/mariner superfamily transposon Minos in Ciona intestinalis.

Authors:  Yasunori Sasakura; Satoko Awazu; Shota Chiba; Nori Satoh
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-03       Impact factor: 11.205

2.  Optimized conditions for transgenesis of the ascidian Ciona using square wave electroporation.

Authors:  David A Vierra; Steven Q Irvine
Journal:  Dev Genes Evol       Date:  2012-01-13       Impact factor: 0.900

3.  Initial deployment of the cardiogenic gene regulatory network in the basal chordate, Ciona intestinalis.

Authors:  Arielle Woznica; Maximilian Haeussler; Ella Starobinska; Jessica Jemmett; Younan Li; David Mount; Brad Davidson
Journal:  Dev Biol       Date:  2012-05-14       Impact factor: 3.582

Review 4.  Ciona intestinalis as a model for cardiac development.

Authors:  Brad Davidson
Journal:  Semin Cell Dev Biol       Date:  2006-12-20       Impact factor: 7.727

5.  Temporal regulation of the muscle gene cascade by Macho1 and Tbx6 transcription factors in Ciona intestinalis.

Authors:  Jamie E Kugler; Stefan Gazdoiu; Izumi Oda-Ishii; Yale J Passamaneck; Albert J Erives; Anna Di Gregorio
Journal:  J Cell Sci       Date:  2010-07-15       Impact factor: 5.285

Review 6.  Insulin-like genes in ascidians: findings in Ciona and hypotheses on the evolutionary origins of the pancreas.

Authors:  Jordan M Thompson; Anna Di Gregorio
Journal:  Genesis       Date:  2014-11-12       Impact factor: 2.487

7.  Cis-regulatory organization of the Pax6 gene in the ascidian Ciona intestinalis.

Authors:  Steven Q Irvine; Vera C Fonseca; Michael A Zompa; Rajee Antony
Journal:  Dev Biol       Date:  2008-02-13       Impact factor: 3.582

8.  Tbx2/3 is an essential mediator within the Brachyury gene network during Ciona notochord development.

Authors:  Diana S José-Edwards; Izumi Oda-Ishii; Yutaka Nibu; Anna Di Gregorio
Journal:  Development       Date:  2013-06       Impact factor: 6.868

9.  Evolutionary changes in the notochord genetic toolkit: a comparative analysis of notochord genes in the ascidian Ciona and the larvacean Oikopleura.

Authors:  Jamie E Kugler; Pierre Kerner; Jean-Marie Bouquet; Di Jiang; Anna Di Gregorio
Journal:  BMC Evol Biol       Date:  2011-01-20       Impact factor: 3.260

10.  Effects of in ovo electroporation on endogenous gene expression: genome-wide analysis.

Authors:  Emma K Farley; Emily Gale; David Chambers; Meng Li
Journal:  Neural Dev       Date:  2011-04-28       Impact factor: 3.842

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