Literature DB >> 12145752

Usher syndrome type III: revised genomic structure of the USH3 gene and identification of novel mutations.

Randall R Fields1, Guimei Zhou, Dali Huang, Jack R Davis, Claes Möller, Samuel G Jacobson, William J Kimberling, Janos Sumegi.   

Abstract

Usher syndrome type III is an autosomal recessive disorder characterized by progressive sensorineural hearing loss, vestibular dysfunction, and retinitis pigmentosa. The disease gene was localized to 3q25 and recently was identified by positional cloning. In the present study, we have revised the structure of the USH3 gene, including a new translation start site, 5' untranslated region, and a transcript encoding a 232-amino acid protein. The mature form of the protein is predicted to contain three transmembrane domains and 204 residues. We have found four new disease-causing mutations, including one that appears to be relatively common in the Ashkenazi Jewish population. We have also identified mouse (chromosome 3) and rat (chromosome 2) orthologues, as well as two human paralogues on chromosomes 4 and 10.

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Year:  2002        PMID: 12145752      PMCID: PMC449697          DOI: 10.1086/342098

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  8 in total

Review 1.  Genetic heterogeneity of Usher syndrome.

Authors:  W J Kimberling; D Orten; S Pieke-Dahl
Journal:  Adv Otorhinolaryngol       Date:  2000

2.  A sequence-ready map of the Usher syndrome type III critical region on chromosome 3q.

Authors:  T Joensuu; R Hämäläinen; A E Lehesjoki; A de la Chapelle; E M Sankila
Journal:  Genomics       Date:  2000-02-01       Impact factor: 5.736

3.  Mutations in the myosin VIIA gene cause a wide phenotypic spectrum, including atypical Usher syndrome.

Authors:  X Z Liu; C Hope; J Walsh; V Newton; X M Ke; C Y Liang; L R Xu; J M Zhou; D Trump; K P Steel; S Bundey; S D Brown
Journal:  Am J Hum Genet       Date:  1998-09       Impact factor: 11.025

4.  Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites.

Authors:  H Nielsen; J Engelbrecht; S Brunak; G von Heijne
Journal:  Protein Eng       Date:  1997-01

5.  Multiple sequence alignment with hierarchical clustering.

Authors:  F Corpet
Journal:  Nucleic Acids Res       Date:  1988-11-25       Impact factor: 16.971

6.  Genetic heterogeneity of Usher syndrome: analysis of 151 families with Usher type I.

Authors:  L M Astuto; M D Weston; C A Carney; D M Hoover; C W Cremers; M Wagenaar; C Moller; R J Smith; S Pieke-Dahl; J Greenberg; R Ramesar; S G Jacobson; C Ayuso; J R Heckenlively; M Tamayo; M B Gorin; W Reardon; W J Kimberling
Journal:  Am J Hum Genet       Date:  2000-11-01       Impact factor: 11.025

7.  Refined mapping of the Usher syndrome type III locus on chromosome 3, exclusion of candidate genes, and identification of the putative mouse homologous region.

Authors:  T Joensuu; G Blanco; L Pakarinen; P Sistonen; H Kääriäinen; S Brown; A Chapelle; E M Sankila
Journal:  Genomics       Date:  1996-12-15       Impact factor: 5.736

8.  Mutations in a novel gene with transmembrane domains underlie Usher syndrome type 3.

Authors:  T Joensuu; R Hämäläinen; B Yuan; C Johnson; S Tegelberg; P Gasparini; L Zelante; U Pirvola; L Pakarinen; A E Lehesjoki; A de la Chapelle; E M Sankila
Journal:  Am J Hum Genet       Date:  2001-08-27       Impact factor: 11.025

  8 in total
  36 in total

Review 1.  The Finnish Disease Heritage III: the individual diseases.

Authors:  Reijo Norio
Journal:  Hum Genet       Date:  2003-03-08       Impact factor: 4.132

Review 2.  Genetics and pathological mechanisms of Usher syndrome.

Authors:  Denise Yan; Xue Z Liu
Journal:  J Hum Genet       Date:  2010-04-09       Impact factor: 3.172

3.  Vision Loss in a Teenage Girl With Postconcussion Syndrome.

Authors:  Hasenin Al-Khersan; Tim Hain; Michael A Grassi
Journal:  JAMA Ophthalmol       Date:  2017-01-01       Impact factor: 7.389

Review 4.  Usher syndrome: Hearing loss, retinal degeneration and associated abnormalities.

Authors:  Pranav Mathur; Jun Yang
Journal:  Biochim Biophys Acta       Date:  2014-12-04

5.  Mutation analysis in the long isoform of USH2A in American patients with Usher Syndrome type II.

Authors:  Denise Yan; Xiaomei Ouyang; D Michael Patterson; Li Lin Du; Samuel G Jacobson; Xue-Zhong Liu
Journal:  J Hum Genet       Date:  2009-10-30       Impact factor: 3.172

Review 6.  [Genetics of Usher syndrome].

Authors:  H J Bolz
Journal:  Ophthalmologe       Date:  2009-06       Impact factor: 1.059

Review 7.  Usher protein functions in hair cells and photoreceptors.

Authors:  Dominic Cosgrove; Marisa Zallocchi
Journal:  Int J Biochem Cell Biol       Date:  2013-11-12       Impact factor: 5.085

8.  Cone structure in patients with usher syndrome type III and mutations in the Clarin 1 gene.

Authors:  Kavitha Ratnam; Hanna Västinsalo; Austin Roorda; Eeva-Marja K Sankila; Jacque L Duncan
Journal:  JAMA Ophthalmol       Date:  2013-01       Impact factor: 7.389

9.  CLRN1 is nonessential in the mouse retina but is required for cochlear hair cell development.

Authors:  Scott F Geller; Karen I Guerin; Meike Visel; Aaron Pham; Edwin S Lee; Amiel A Dror; Karen B Avraham; Toshinori Hayashi; Catherine A Ray; Thomas A Reh; Olivia Bermingham-McDonogh; William J Triffo; Shaowen Bao; Juha Isosomppi; Hanna Västinsalo; Eeva-Marja Sankila; John G Flannery
Journal:  PLoS Genet       Date:  2009-08-14       Impact factor: 5.917

10.  Disease-causing mutations in the CLRN1 gene alter normal CLRN1 protein trafficking to the plasma membrane.

Authors:  Juha Isosomppi; Hanna Västinsalo; Scott F Geller; Elise Heon; John G Flannery; Eeva-Marja Sankila
Journal:  Mol Vis       Date:  2009-09-08       Impact factor: 2.367

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