Literature DB >> 12144515

Promiscuous binding nature of SH3 domains to their target proteins.

Vishal Agrawal1, K V Radha Kishan.   

Abstract

SH3 domains are small but important domains in cell-signaling and function through protein-protein interactions. Their promiscuous nature in binding to polyproline peptides makes them much more important because many SH3 domains from different proteins bind to different proteins having polyproline template on their surface. Very subtle changes in the sequence of SH3 domains and the binding peptides determine the specificity of the peptide binding. Recent observation that SH3 domains bind to non- proline peptides makes the scenario of peptide binding involving SH3 domains complicated. If domain swapped dimerization as observed in Eps8-SH3 domain also binds different peptides, it proves the versatility of the SH3 domains in binding to peptides in various ways. An overview of the promiscuity of SH3 domains has been discussed.

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Year:  2002        PMID: 12144515     DOI: 10.2174/0929866023408760

Source DB:  PubMed          Journal:  Protein Pept Lett        ISSN: 0929-8665            Impact factor:   1.890


  15 in total

1.  Postsynaptic enrichment of Eps8 at dendritic shaft synapses of unipolar brush cells in rat cerebellum.

Authors:  G Sekerková; M R Diño; E Ilijic; M Russo; L Zheng; J R Bartles; E Mugnaini
Journal:  Neuroscience       Date:  2007-01-16       Impact factor: 3.590

2.  Murine Itk SH3 domain.

Authors:  Andrew Severin; D Bruce Fulton; Amy H Andreotti
Journal:  J Biomol NMR       Date:  2008-03-05       Impact factor: 2.835

3.  Structural, functional, and bioinformatic studies demonstrate the crucial role of an extended peptide binding site for the SH3 domain of yeast Abp1p.

Authors:  Elliott J Stollar; Bianca Garcia; P Andrew Chong; Arianna Rath; Hong Lin; Julie D Forman-Kay; Alan R Davidson
Journal:  J Biol Chem       Date:  2009-07-09       Impact factor: 5.157

4.  The SH3 domain of a M7 interacts with its C-terminal proline-rich region.

Authors:  Qinghua Wang; Matthew A Deloia; Yang Kang; Casey Litchke; Naixia Zhang; Margaret A Titus; Kylie J Walters
Journal:  Protein Sci       Date:  2006-12-22       Impact factor: 6.725

5.  The nature of protein domain evolution: shaping the interaction network.

Authors:  Christoph P Bagowski; Wouter Bruins; Aartjan J W Te Velthuis
Journal:  Curr Genomics       Date:  2010-08       Impact factor: 2.236

6.  Interplay between SCARECROW, GA and LIKE HETEROCHROMATIN PROTEIN 1 in ground tissue patterning in the Arabidopsis root.

Authors:  Hongchang Cui; Philip N Benfey
Journal:  Plant J       Date:  2009-02-18       Impact factor: 6.417

7.  SH3 domain tyrosine phosphorylation--sites, role and evolution.

Authors:  Zuzana Tatárová; Jan Brábek; Daniel Rösel; Marian Novotný
Journal:  PLoS One       Date:  2012-05-15       Impact factor: 3.240

8.  Structural modeling of protein interactions by analogy: application to PSD-95.

Authors:  Dmitry Korkin; Fred P Davis; Frank Alber; Tinh Luong; Min-Yi Shen; Vladan Lucic; Mary B Kennedy; Andrej Sali
Journal:  PLoS Comput Biol       Date:  2006-10-04       Impact factor: 4.475

9.  Nuclear Factor 90, a cellular dsRNA binding protein inhibits the HIV Rev-export function.

Authors:  Silvio Urcuqui-Inchima; Maria Eugenia Castaño; Danièle Hernandez-Verdun; Georges St-Laurent; Ajit Kumar
Journal:  Retrovirology       Date:  2006-11-24       Impact factor: 4.602

Review 10.  Polyproline and triple helix motifs in host-pathogen recognition.

Authors:  Rita Berisio; Luigi Vitagliano
Journal:  Curr Protein Pept Sci       Date:  2012-12       Impact factor: 3.272

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