Literature DB >> 12142431

Microarray transcription profiling of a Shewanella oneidensis etrA mutant.

Alex S Beliaev1, Dorothea K Thompson, Matthew W Fields, Liyou Wu, Douglas P Lies, Kenneth H Nealson, Jizhong Zhou.   

Abstract

DNA microarrays were used to examine the effect of an insertional mutation in the Shewanella oneidensis etrA (electron transport regulator) locus on gene expression under anaerobic conditions. The mRNA levels of 69 genes with documented functions in energy and carbon metabolism, regulation, transport, and other cellular processes displayed significant alterations in transcript abundance in an etrA-mutant genetic background. This is the first microarray study indicating a possible involvement of EtrA in the regulation of gene expression in S. oneidensis MR-1.

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Keywords:  Non-programmatic

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Year:  2002        PMID： 12142431      PMCID： PMC135233          DOI： 10.1128/JB.184.16.4612-4616.2002

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  26 in total

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Journal:  Appl Environ Microbiol       Date:  2002-02       Impact factor: 4.792

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Authors:  Alex S Beliaev; Dorothea K Thompson; Tripti Khare; Hanjo Lim; Craig C Brandt; Guangshan Li; Alison E Murray; John F Heidelberg; Carol S Giometti; John Yates; Kenneth H Nealson; James M Tiedje; Jizhong Zhoui
Journal:  OMICS       Date:  2002

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Journal:  Annu Rev Microbiol       Date:  1999       Impact factor: 15.500

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Authors:  T M Maier; C R Myers
Journal:  J Bacteriol       Date:  2001-08       Impact factor: 3.490

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Journal:  J Bacteriol       Date:  1985-12       Impact factor: 3.490

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Journal:  J Bacteriol       Date:  1993-12       Impact factor: 3.490

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Authors:  K H Nealson; D Saffarini
Journal:  Annu Rev Microbiol       Date:  1994       Impact factor: 15.500
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  32 in total

1.  Microbial genomics--challenges and opportunities: the 9th International Conference on Microbial Genomes.

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Review 4.  Bioinformatics resources for the study of gene regulation in bacteria.

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Journal:  J Bacteriol       Date:  2008-10-31       Impact factor: 3.490

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Journal:  Appl Environ Microbiol       Date:  2010-03-26       Impact factor: 4.792

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Authors:  Kai M Thormann; Renée M Saville; Soni Shukla; Alfred M Spormann
Journal:  J Bacteriol       Date:  2005-02       Impact factor: 3.490

7.  Transcriptome analysis of Shewanella oneidensis MR-1 in response to elevated salt conditions.

Authors:  Yongqing Liu; Weimin Gao; Yue Wang; Liyou Wu; Xueduan Liu; Tinfeng Yan; Eric Alm; Adam Arkin; Dorothea K Thompson; Matthew W Fields; Jizhong Zhou
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Authors:  Mustafa H Syed; Tatiana V Karpinets; Michael R Leuze; Guruprasad H Kora; Margaret R Romine; Edward C Uberbacher
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10.  Involvement of cyclic AMP (cAMP) and cAMP receptor protein in anaerobic respiration of Shewanella oneidensis.

Authors:  Daad A Saffarini; Ryan Schultz; Alex Beliaev
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