Literature DB >> 12142358

Human migrations and population structure: what we know and why it matters.

David B Goldstein1, Lounès Chikhi.   

Abstract

The increasingly obvious medical relevance of human genetic variation is fueling the development of a rich interface between medical genetics and the study of human genetic history. A key feature of this interface is a step increase in the size and diversity of genetic data sets, permitting a range of new questions to be addressed concerning our evolutionary history. Similarly, methodologies first developed to study genetic history are being tailored to address medical challenges, including mapping genes that influence diseases and variable drug reactions. In this paper we do not attempt a comprehensive review of human genetic history. Rather we briefly outline some of the complications and challenges in the study of human genetic history, drawing particular attention to new opportunities created by the explosive growth in genetic information and technologies. First we discuss the complexity of human migration and demographic history, taking both a genetic and archaeological perspective. Then we show how these apparently academic issues are becoming increasingly important in medical genetics, focusing on association studies, the common disease/common variant hypothesis, the evaluation of variable drug response, and inferences about gene function from patterns of genetic variation. Finally we describe some of the inferential approaches available for interpreting human genetic variation, focusing both on current limitations and future developments.

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Year:  2002        PMID: 12142358     DOI: 10.1146/annurev.genom.3.022502.103200

Source DB:  PubMed          Journal:  Annu Rev Genomics Hum Genet        ISSN: 1527-8204            Impact factor:   8.929


  39 in total

1.  Interrogating a high-density SNP map for signatures of natural selection.

Authors:  Joshua M Akey; Ge Zhang; Kun Zhang; Li Jin; Mark D Shriver
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

2.  Population divergence with or without admixture: selecting models using an ABC approach.

Authors:  V C Sousa; M A Beaumont; P Fernandes; M M Coelho; L Chikhi
Journal:  Heredity (Edinb)       Date:  2011-12-07       Impact factor: 3.821

3.  The confounding effects of population structure, genetic diversity and the sampling scheme on the detection and quantification of population size changes.

Authors:  Lounès Chikhi; Vitor C Sousa; Pierre Luisi; Benoit Goossens; Mark A Beaumont
Journal:  Genetics       Date:  2010-08-25       Impact factor: 4.562

4.  On the importance of being structured: instantaneous coalescence rates and human evolution--lessons for ancestral population size inference?

Authors:  O Mazet; W Rodríguez; S Grusea; S Boitard; L Chikhi
Journal:  Heredity (Edinb)       Date:  2015-12-09       Impact factor: 3.821

5.  Origins and evolution of the Europeans' genome: evidence from multiple microsatellite loci.

Authors:  Elise M S Belle; Pierre-Alexandre Landry; Guido Barbujani
Journal:  Proc Biol Sci       Date:  2006-07-07       Impact factor: 5.349

6.  Why did modern human populations disperse from Africa ca. 60,000 years ago? A new model.

Authors:  Paul Mellars
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-13       Impact factor: 11.205

7.  Signatures of demographic history and natural selection in the human major histocompatibility complex Loci.

Authors:  Diogo Meyer; Richard M Single; Steven J Mack; Henry A Erlich; Glenys Thomson
Journal:  Genetics       Date:  2006-05-15       Impact factor: 4.562

8.  Statistical evaluation of alternative models of human evolution.

Authors:  Nelson J R Fagundes; Nicolas Ray; Mark Beaumont; Samuel Neuenschwander; Francisco M Salzano; Sandro L Bonatto; Laurent Excoffier
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-31       Impact factor: 11.205

Review 9.  Genetic foundations of human intelligence.

Authors:  Ian J Deary; W Johnson; L M Houlihan
Journal:  Hum Genet       Date:  2009-03-18       Impact factor: 4.132

10.  Genetic variation in South Indian castes: evidence from Y-chromosome, mitochondrial, and autosomal polymorphisms.

Authors:  W S Watkins; R Thara; B J Mowry; Y Zhang; D J Witherspoon; W Tolpinrud; M J Bamshad; S Tirupati; R Padmavati; H Smith; D Nancarrow; C Filippich; L B Jorde
Journal:  BMC Genet       Date:  2008-12-12       Impact factor: 2.797

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