Literature DB >> 12124291

Liquid crystal formation in supercoiled DNA solutions.

Svetlana S Zakharova1, Wim Jesse, Claude Backendorf, Johan R C van der Maarel.   

Abstract

The critical concentrations pertaining to the liquid crystal formation of pUC18 plasmid in saline solutions were obtained from (31)P nuclear magnetic resonance, polarized light microscopy, and phase equilibrium experiments. The transition is strongly first order with a broad gap between the isotropic and anisotropic phase. The critical boundaries are strongly and reversibly dependent on temperature and weakly dependent on ionic strength. With polarized light microscopy on magnetically oriented samples, the liquid crystalline phase is assigned cholesteric with a pitch on the order of 4 microm. Preliminary results show that at higher concentrations a true crystal is formed. The isotropic-cholesteric transition is interpreted with lyotropic liquid crystal theory including the effects of charge, orientation entropy, and excluded volume effects. It was found that the molecular free energy associated with the topology of the superhelix is of paramount importance in controlling the width of the phase gap. The theoretical results compare favorably with the critical boundary pertaining to the disappearance of the isotropic phase, but they fail to predict the low concentration at which the anisotropic phase first appears.

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Year:  2002        PMID: 12124291      PMCID: PMC1302213          DOI: 10.1016/S0006-3495(02)75235-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  23 in total

1.  Electrostatic-undulatory theory of plectonemically supercoiled DNA.

Authors:  J Ubbink; T Odijk
Journal:  Biophys J       Date:  1999-05       Impact factor: 4.033

2.  Electron and scanning force microscopy studies of alterations in supercoiled DNA tertiary structure.

Authors:  D I Cherny; T M Jovin
Journal:  J Mol Biol       Date:  2001-10-19       Impact factor: 5.469

3.  Dimensions of plectonemically supercoiled DNA.

Authors:  Svetlana S Zakharova; Wim Jesse; Claude Backendorf; Stefan U Egelhaaf; Alain Lapp; Johan R C van der Maarel
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

4.  DNA supercoiling depends on the phosphorylation potential in Escherichia coli.

Authors:  M van Workum; S J van Dooren; N Oldenburg; D Molenaar; P R Jensen; J L Snoep; H V Westerhoff
Journal:  Mol Microbiol       Date:  1996-04       Impact factor: 3.501

5.  Statistical mechanics of supercoiled DNA.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1995-09

6.  Behavior of supercoiled DNA.

Authors:  T R Strick; J F Allemand; D Bensimon; V Croquette
Journal:  Biophys J       Date:  1998-04       Impact factor: 4.033

7.  An efficient method for large-scale isolation of plasmid DNAs by heat-alkali co-denaturation.

Authors:  N E Sun; B H Shen; J M Zhou; J Yuan; X X Xu; D X Zhu; K K Han
Journal:  DNA Cell Biol       Date:  1994-01       Impact factor: 3.311

8.  Liquid-crystalline mesophases of plasmid DNA in bacteria.

Authors:  Z Reich; E J Wachtel; A Minsky
Journal:  Science       Date:  1994-06-03       Impact factor: 47.728

9.  DNA length and concentration dependencies of anisotropic phase transitions of DNA solutions.

Authors:  K Merchant; R L Rill
Journal:  Biophys J       Date:  1997-12       Impact factor: 4.033

10.  Liquid crystal formation in DNA fragment solutions.

Authors:  K Kassapidou; W Jesse; J A van Dijk; J R van der Maarel
Journal:  Biopolymers       Date:  1998-07       Impact factor: 2.505

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  2 in total

1.  Polarization-sensitive two-photon microscopy study of the organization of liquid-crystalline DNA.

Authors:  Halina Mojzisova; Joanna Olesiak; Marcin Zielinski; Katarzyna Matczyszyn; Dominique Chauvat; Joseph Zyss
Journal:  Biophys J       Date:  2009-10-21       Impact factor: 4.033

2.  A histone-like protein induces plasmid DNA to form liquid crystals in vitro and gene compaction in vivo.

Authors:  Shiyong Sun; Mingxue Liu; Faqin Dong; Shenglan Fan; Yanchen Yao
Journal:  Int J Mol Sci       Date:  2013-12-06       Impact factor: 5.923

  2 in total

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