Literature DB >> 12102530

Ploidy levels among species in the 'Oxalis tuberosa alliance' as inferred by flow cytometry.

Eve Emshwiller1.   

Abstract

The 'Oxalis tuberosa alliance' is a group of Andean Oxalis species allied to the Andean tuber crop O. tuberosa Molina (Oxalidaceae), commonly known as 'oca'. As part of a larger project studying the origins of polyploidy and domestication of cultivated oca, flow cytometry was used to survey DNA ploidy levels among Bolivian and Peruvian accessions of alliance members. In addition, this study provided a first assessment of C-values in the alliance by estimating nuclear DNA contents of these accessions using chicken erythrocytes as internal standard. Ten Bolivian accessions of cultivated O. tuberosa were confirmed to be octoploid, with a mean nuclear DNA content of approx. 3.6 pg/2C. Two Peruvian wild Oxalis species, O. phaeotricha and O. picchensis, were inferred to be tetraploid (both with approx. 1.67 pg/2C), the latter being one of the putative progenitors of O. tuberosa identified by chloroplast-expressed glutamine synthetase data in prior work. The remaining accessions (from 78 populations provisionally identified as 35 species) were DNA diploid, with nuclear DNA contents varying from 0.79 to 1.34 pg/2C.

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Year:  2002        PMID: 12102530      PMCID: PMC4233841          DOI: 10.1093/aob/mcf135

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  13 in total

1.  Chloroplast-expressed glutamine synthetase (ncpGS): potential utility for phylogenetic studies with an example from Oxalis (Oxalidaceae).

Authors:  E Emshwiller; J J Doyle
Journal:  Mol Phylogenet Evol       Date:  1999-08       Impact factor: 4.286

2.  Reference standards for determination of DNA content of plant nuclei.

Authors:  J S Johnston; M D Bennett; A L Rayburn; D W Galbraith; H J Price
Journal:  Am J Bot       Date:  1999-05       Impact factor: 3.844

3.  Relationship between Endopolyploidy and Cell Size in Epidermal Tissue of Arabidopsis.

Authors:  J. E. Melaragno; B. Mehrotra; A. W. Coleman
Journal:  Plant Cell       Date:  1993-11       Impact factor: 11.277

4.  Determination of ploidy level and nuclear DNA content in blueberry by flow cytometry.

Authors:  D E Costich; R Ortiz; T R Meagher; L P Bruederle; N Vorsa
Journal:  Theor Appl Genet       Date:  1993-09       Impact factor: 5.699

5.  Developmentally regulated systemic endopolyploid in succulents with small genomes.

Authors:  E J De Rocher; K R Harkins; D W Galbraith; H J Bohnert
Journal:  Science       Date:  1990-10-05       Impact factor: 47.728

6.  Origins of domestication and polyploidy in oca (Oxalis tuberosa : Oxalidaceae): nrDNA ITS data.

Authors:  E Emshwiller; J Doyle
Journal:  Am J Bot       Date:  1998-07       Impact factor: 3.844

7.  Sequence analysis of the 5.8S ribosomal DNA and internal transcribed spacers (ITS1 and ITS2) from five species of the Oxalis tuberosa alliance.

Authors:  D S Tosto; H E Hopp
Journal:  DNA Seq       Date:  1996

8.  Origins of domestication and polyploidy in oca (Oxalis Tuberosa: Oxalidaceae). 2. Chloroplast-expressed glutamine synthetase data.

Authors:  Eve Emshwiller; Jeff J Doyle
Journal:  Am J Bot       Date:  2002-07       Impact factor: 3.844

9.  Sex determination in dioecious plants Melandrium album and M. rubrum using high-resolution flow cytometry.

Authors:  J Dolezel; W Göhde
Journal:  Cytometry       Date:  1995-02-01

10.  On the evolution of genome size of birds.

Authors:  T R Tiersch; S S Wachtel
Journal:  J Hered       Date:  1991 Sep-Oct       Impact factor: 2.645

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  12 in total

1.  Triploidy in Equisetum subgenus Hippochaete (Equisetaceae, Pteridophyta).

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Journal:  Ann Bot       Date:  2005-02-14       Impact factor: 4.357

Review 2.  Plant DNA flow cytometry and estimation of nuclear genome size.

Authors:  Jaroslav Dolezel; Jan Bartos
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Review 3.  Nuclear DNA amounts in angiosperms: progress, problems and prospects.

Authors:  M D Bennett; I J Leitch
Journal:  Ann Bot       Date:  2005-01       Impact factor: 4.357

4.  Distribution of flower morphs, ploidy level and sexual reproduction of the invasive weed Oxalis pes-caprae in the western area of the Mediterranean region.

Authors:  Sílvia Castro; João Loureiro; Conceição Santos; Mohammed Ater; Garbiñe Ayensa; Luis Navarro
Journal:  Ann Bot       Date:  2007-01-11       Impact factor: 4.357

5.  Novel nuclei isolation buffer for flow cytometric genome size estimation of Zingiberaceae: a comparison with common isolation buffers.

Authors:  Abhishek Sadhu; Sreetama Bhadra; Maumita Bandyopadhyay
Journal:  Ann Bot       Date:  2016-09-04       Impact factor: 4.357

6.  Comparison of four nuclear isolation buffers for plant DNA flow cytometry.

Authors:  João Loureiro; Eleazar Rodriguez; Jaroslav Dolezel; Conceição Santos
Journal:  Ann Bot       Date:  2006-07-04       Impact factor: 4.357

7.  Late Archaic-Early Formative period microbotanical evidence for potato at Jiskairumoko in the Titicaca Basin of southern Peru.

Authors:  Claudia Ursula Rumold; Mark S Aldenderfer
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-14       Impact factor: 11.205

8.  Next-generation sequencing based genotyping, cytometry and phenotyping for understanding diversity and evolution of Guinea yams.

Authors:  Gezahegn Girma; Katie E Hyma; Robert Asiedu; Sharon E Mitchell; Melaku Gedil; Charles Spillane
Journal:  Theor Appl Genet       Date:  2014-07-01       Impact factor: 5.699

9.  Assessment of ploidy stability of the somatic embryogenesis process in Quercus suber L. using flow cytometry.

Authors:  J Loureiro; G Pinto; T Lopes; J Dolezel; C Santos
Journal:  Planta       Date:  2005-03-03       Impact factor: 4.116

10.  Analysis of the genetic stability of Eucalyptus globulus Labill. somatic embryos by flow cytometry.

Authors:  G Pinto; J Loureiro; T Lopes; C Santos
Journal:  Theor Appl Genet       Date:  2004-04-14       Impact factor: 5.699

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