Literature DB >> 12086522

Evaluation of a novel electronic eigenvalue (EEVA) molecular descriptor for QSAR/QSPR studies: validation using a benchmark steroid data set.

Kari Tuppurainen1, Marja Viisas, Reino Laatikainen, Mikael Peräkylä.   

Abstract

A novel electronic eigenvalue (EEVA) descriptor of molecular structure for use in the derivation of predictive QSAR/QSPR models is described. Like other spectroscopic QSAR/QSPR descriptors, EEVA is also invariant as to the alignment of the structures concerned. Its performance was tested with respect to the CBG (corticosteroid binding globulin) affinity of 31 benchmark steroids. It appeared that the electronic structure of the steroids, i.e., the "spectra" derived from molecular orbital energies, is directly related to the CBG binding affinities. The predictive ability of EEVA is compared to other QSAR approaches, and its performance is discussed in the context of the Hammett equation. The good performance of EEVA is an indication of the essential quantum mechanical nature of QSAR. The EEVA method is a supplement to conventional 3D QSAR methods, which employ fields or surface properties derived from Coulombic and van der Waals interactions.

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Year:  2002        PMID: 12086522     DOI: 10.1021/ci0103830

Source DB:  PubMed          Journal:  J Chem Inf Comput Sci        ISSN: 0095-2338


  2 in total

1.  Ligand intramolecular motions in ligand-protein interaction: ALPHA, a novel dynamic descriptor and a QSAR study with extended steroid benchmark dataset.

Authors:  Kari Tuppurainen; Marja Viisas; Mikael Peräkylä; Reino Laatikainen
Journal:  J Comput Aided Mol Des       Date:  2004-03       Impact factor: 3.686

2.  QuBiLS-MAS, open source multi-platform software for atom- and bond-based topological (2D) and chiral (2.5D) algebraic molecular descriptors computations.

Authors:  José R Valdés-Martiní; Yovani Marrero-Ponce; César R García-Jacas; Karina Martinez-Mayorga; Stephen J Barigye; Yasser Silveira Vaz d'Almeida; Hai Pham-The; Facundo Pérez-Giménez; Carlos A Morell
Journal:  J Cheminform       Date:  2017-06-07       Impact factor: 5.514

  2 in total

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