Literature DB >> 12081963

Group I self-splicing intron in the recA gene of Bacillus anthracis.

Minsu Ko1, Hyang Choi, Chankyu Park.   

Abstract

Self-splicing introns are rarely found in bacteria and bacteriophages. They are classified into group I and II according to their structural features and splicing mechanisms. While the group I introns are occasionally found in protein-coding regions of phage genomes and in several tRNA genes of cyanobacteria and proteobacteria, they had not been found in protein-coding regions of bacterial genomes. Here we report a group I intron in the recA gene of Bacillus anthracis which was initially found by DNA sequencing as an intervening sequence (IVS). By using reverse transcriptase PCR, the IVS was shown to be removable from the recA precursor mRNA for RecA that was being translated in E. coli. The splicing was visualized in vitro with labeled free GTP, indicating that it is a group I intron, which is also implied by its predicted secondary structure. The RecA protein of B. anthracis expressed in E. coli was functional in its ability to complement a recA defect. When recA-negative E. coli cells were irradiated with UV, the Bacillus RecA reduced the UV susceptibility of the recA mutant, regardless of the presence of intron.

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Year:  2002        PMID: 12081963      PMCID: PMC135159          DOI: 10.1128/JB.184.14.3917-3922.2002

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  38 in total

1.  Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis.

Authors:  F Michel; E Westhof
Journal:  J Mol Biol       Date:  1990-12-05       Impact factor: 5.469

Review 2.  General microbiology of recA: environmental and evolutionary significance.

Authors:  R V Miller; T A Kokjohn
Journal:  Annu Rev Microbiol       Date:  1990       Impact factor: 15.500

3.  Bacterial origin of a chloroplast intron: conserved self-splicing group I introns in cyanobacteria.

Authors:  M Q Xu; S D Kathe; H Goodrich-Blair; S A Nierzwicki-Bauer; D A Shub
Journal:  Science       Date:  1990-12-14       Impact factor: 47.728

4.  An ancient group I intron shared by eubacteria and chloroplasts.

Authors:  M G Kuhsel; R Strickland; J D Palmer
Journal:  Science       Date:  1990-12-14       Impact factor: 47.728

Review 5.  The RecA protein: structure and function.

Authors:  A I Roca; M M Cox
Journal:  Crit Rev Biochem Mol Biol       Date:  1990       Impact factor: 8.250

Review 6.  Self-splicing of group I introns.

Authors:  T R Cech
Journal:  Annu Rev Biochem       Date:  1990       Impact factor: 23.643

7.  A self-splicing group I intron in the DNA polymerase gene of Bacillus subtilis bacteriophage SPO1.

Authors:  H Goodrich-Blair; V Scarlato; J M Gott; M Q Xu; D A Shub
Journal:  Cell       Date:  1990-10-19       Impact factor: 41.582

8.  Making ends meet: a model for RNA splicing in fungal mitochondria.

Authors:  R W Davies; R B Waring; J A Ray; T A Brown; C Scazzocchio
Journal:  Nature       Date:  1982-12-23       Impact factor: 49.962

9.  Purified lexA protein is a repressor of the recA and lexA genes.

Authors:  J W Little; D W Mount; C R Yanisch-Perron
Journal:  Proc Natl Acad Sci U S A       Date:  1981-07       Impact factor: 11.205

10.  Intervening sequence in the thymidylate synthase gene of bacteriophage T4.

Authors:  F K Chu; G F Maley; F Maley; M Belfort
Journal:  Proc Natl Acad Sci U S A       Date:  1984-05       Impact factor: 11.205

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  15 in total

1.  Introns in the cytolethal distending toxin gene of Actinobacillus actinomycetemcomitans.

Authors:  Kai Soo Tan; Grace Ong; Keang Peng Song
Journal:  J Bacteriol       Date:  2005-01       Impact factor: 3.490

2.  Unusual group II introns in bacteria of the Bacillus cereus group.

Authors:  Nicolas J Tourasse; Fredrik B Stabell; Lillian Reiter; Anne-Brit Kolstø
Journal:  J Bacteriol       Date:  2005-08       Impact factor: 3.490

3.  Rare group I intron with insertion sequence element in a bacterial ribonucleotide reductase gene.

Authors:  Qing Meng; Yi Zhang; Xiang-Qin Liu
Journal:  J Bacteriol       Date:  2006-12-15       Impact factor: 3.490

4.  Mapping the RNA-Seq trash bin: unusual transcripts in prokaryotic transcriptome sequencing data.

Authors:  Gero Doose; Maria Alexis; Rebecca Kirsch; Sven Findeiß; David Langenberger; Rainer Machné; Mario Mörl; Steve Hoffmann; Peter F Stadler
Journal:  RNA Biol       Date:  2013-05-13       Impact factor: 4.652

5.  Detection of a group II intron without an open reading frame in the alpha-toxin gene of Clostridium perfringens isolated from a broiler chicken.

Authors:  Menglin Ma; Kaori Ohtani; Tohru Shimizu; Naoaki Misawa
Journal:  J Bacteriol       Date:  2006-12-08       Impact factor: 3.490

6.  A functional homing endonuclease in the Bacillus anthracis nrdE group I intron.

Authors:  David Nord; Eduard Torrents; Britt-Marie Sjöberg
Journal:  J Bacteriol       Date:  2007-05-11       Impact factor: 3.490

7.  I-PfoP3I: a novel nicking HNH homing endonuclease encoded in the group I intron of the DNA polymerase gene in Phormidium foveolarum phage Pf-WMP3.

Authors:  Shuanglei Kong; Xinyao Liu; Liwen Fu; Xiangchun Yu; Chengcai An
Journal:  PLoS One       Date:  2012-08-27       Impact factor: 3.240

8.  Unconventional GIY-YIG homing endonuclease encoded in group I introns in closely related strains of the Bacillus cereus group.

Authors:  David Nord; Britt-Marie Sjöberg
Journal:  Nucleic Acids Res       Date:  2007-11-21       Impact factor: 16.971

9.  Survey of group I and group II introns in 29 sequenced genomes of the Bacillus cereus group: insights into their spread and evolution.

Authors:  Nicolas J Tourasse; Anne-Brit Kolstø
Journal:  Nucleic Acids Res       Date:  2008-06-28       Impact factor: 16.971

10.  Fractured genes: a novel genomic arrangement involving new split inteins and a new homing endonuclease family.

Authors:  Bareket Dassa; Nir London; Barry L Stoddard; Ora Schueler-Furman; Shmuel Pietrokovski
Journal:  Nucleic Acids Res       Date:  2009-03-05       Impact factor: 16.971

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